Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 MTND4P25-201ENST00000441039 533 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 RPS24P13-201ENST00000442520 397 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC3O60481 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC034236.1-201ENST00000469891 373 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 RPL7P47-201ENST00000497299 556 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 MTCO3P9-201ENST00000506989 781 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 RNU4-29P-201ENST00000515943 174 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 IGKV2-23-201ENST00000518729 323 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.12□□□□□ -1.91
ZIC3O60481 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.12□□□□□ -1.91
ZIC3O60481 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.12□□□□□ -1.91
ZIC3O60481 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 ZNF192P1-203ENST00000565888 810 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC010525.2-201ENST00000590920 195 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AL161798.1-201ENST00000604630 131 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AL158032.1-201ENST00000605401 106 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC3O60481 AL355073.2-201ENST00000612106 557 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AC006504.8-201ENST00000621046 635 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 MTND1P37-201ENST00000636562 264 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AL672296.1-201ENST00000427780 2158 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC3O60481 OR4G1P-203ENST00000641984 1631 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ZIC3O60481 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ZIC3O60481 RNU6-1167P-201ENST00000363227 94 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 RNU6-38P-201ENST00000384085 107 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 Y_RNA.534-201ENST00000384599 112 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 MIR514A2-201ENST00000385131 88 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 MIR514A3-201ENST00000385132 88 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 RNU2-33P-201ENST00000410344 192 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC009237.5-201ENST00000414271 501 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AL451062.2-201ENST00000427515 271 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC009237.8-201ENST00000445492 379 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 MTND3P16-201ENST00000452205 344 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 SNRPFP3-201ENST00000457792 225 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 RNU6-333P-201ENST00000459117 107 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 RPL21P8-201ENST00000465083 535 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AC091153.1-201ENST00000466297 402 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 SNRPGP3-201ENST00000469405 227 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 MTCYBP18-201ENST00000501056 747 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 RNU6-914P-201ENST00000516749 109 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 SNORA20.3-201ENST00000516880 132 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.11□□□□□ -1.91
ZIC3O60481 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.11□□□□□ -1.91
ZIC3O60481 AC098826.3-201ENST00000603823 466 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.11□□□□□ -1.91
ZIC3O60481 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.11□□□□□ -1.91
ZIC3O60481 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
ZIC3O60481 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ZIC3O60481 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC3O60481 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZIC3O60481 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
ZIC3O60481 HSPA8P1-201ENST00000425843 1833 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC032011.1-201ENST00000611703 1549 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 RNU6-512P-201ENST00000364438 103 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 SNORD37.1-201ENST00000390968 65 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms