Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXA2O43364 AC008749.1-201ENST00000597650 306 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXA2O43364 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXA2O43364 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
HOXA2O43364 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXA2O43364 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
HOXA2O43364 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXA2O43364 MUC2-202ENST00000613187 4845 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXA2O43364 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 Y_RNA.136-201ENST00000363444 102 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 Y_RNA.272-201ENST00000364696 102 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 SNORA56-201ENST00000383966 129 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 Y_RNA.497-201ENST00000384447 98 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 RNU6-541P-201ENST00000384709 110 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 Y_RNA.570-201ENST00000384750 101 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 MIR192-201ENST00000384915 110 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 MIR589-201ENST00000385238 99 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXA2O43364 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXA2O43364 AC007919.1-201ENST00000429380 217 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXA2O43364 AC006463.2-201ENST00000473326 348 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXA2O43364 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXA2O43364 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXA2O43364 MIR3921-201ENST00000577308 85 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 MIR4308-201ENST00000580634 81 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 MIR4737-201ENST00000583979 81 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 AC105254.2-201ENST00000603636 436 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 AC108738.1-201ENST00000603703 237 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXA2O43364 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXA2O43364 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXA2O43364 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXA2O43364 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXA2O43364 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.54□□□□□ -1.52
HOXA2O43364 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXA2O43364 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HOXA2O43364 AL353743.1-202ENST00000431724 1695 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HOXA2O43364 AL359693.1-201ENST00000614959 2407 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 Y_RNA.230-201ENST00000364348 109 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 Y_RNA.262-201ENST00000364641 102 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 Y_RNA.580-201ENST00000391004 95 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AL590139.1-201ENST00000416267 400 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AL356867.1-201ENST00000429623 299 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RPL34P20-201ENST00000442771 351 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AC096638.1-201ENST00000444678 216 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA2O43364 RPS5P7-201ENST00000456664 608 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RN7SL443P-201ENST00000464331 290 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RN7SL860P-201ENST00000473738 223 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RPL26P26-201ENST00000480251 434 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RN7SL319P-201ENST00000480656 221 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AC139453.3-201ENST00000493276 369 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 RNA5SP291-201ENST00000517222 105 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXA2O43364 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA2O43364 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA2O43364 AC099669.2-201ENST00000616549 437 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AC006001.4-201ENST00000622243 395 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 AL079305.1-201ENST00000623159 3008 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 AC004076.2-201ENST00000620532 3323 ntBASIC5.53□□□□□ -1.52
HOXA2O43364 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA2O43364 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HOXA2O43364 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA2O43364 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXA2O43364 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms