Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP455-201ENST00000365190 119 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 U3.37-201ENST00000408528 213 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-1245P-201ENST00000411130 106 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 MTATP6P29-201ENST00000415057 132 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 SNRPEP9-201ENST00000436794 238 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 AC009237.8-201ENST00000445492 379 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 SNORD108-201ENST00000459332 71 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 RPL7P49-201ENST00000471402 708 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 AC024405.2-202ENST00000532731 184 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 AC120057.2-201ENST00000571520 271 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR4310-201ENST00000582950 57 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 SNORD113-5-201ENST00000607261 78 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 RN7SKP160-201ENST00000363804 340 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-879P-201ENST00000364328 108 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-326P-201ENST00000365480 107 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR153-2-201ENST00000385225 87 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC017079.2-201ENST00000416102 485 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC108075.1-201ENST00000424692 529 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 COX6CP14-201ENST00000469580 174 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 RN7SL174P-201ENST00000475578 289 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 OR2AO1P-201ENST00000476497 403 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 SNORA70.16-201ENST00000516390 95 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC010928.2-201ENST00000588017 287 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC024153.1-201ENST00000603103 365 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC109309.2-201ENST00000612597 332 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 BX005214.3-202ENST00000619809 325 ntBASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA11Q9Y5H2 AC139713.2-214ENST00000642059 1811 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AL353743.1-202ENST00000431724 1695 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-222P-201ENST00000362438 107 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-102P-201ENST00000384485 104 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR32-201ENST00000384965 70 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR600-201ENST00000385007 98 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MTCO2P33-201ENST00000402100 465 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AL133270.1-201ENST00000402635 279 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AL035079.1-201ENST00000405210 287 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU5A-5P-201ENST00000411054 116 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC007738.1-201ENST00000413892 348 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 COX6CP13-201ENST00000428703 226 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 RPS15AP7-201ENST00000439294 405 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 Z82210.1-201ENST00000440037 231 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 BTF3P6-201ENST00000448054 499 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 HSPE1P25-201ENST00000455484 251 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC107393.1-201ENST00000512403 346 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 IGKV3D-34-201ENST00000522638 302 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AP004607.1-201ENST00000524456 203 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MRPS36P4-201ENST00000534436 298 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC010620.2-201ENST00000600135 313 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 AC136601.2-201ENST00000604356 474 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms