Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 U8.21-201ENST00000459536 136 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 RN7SL98P-201ENST00000462271 300 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 RNU1-86P-201ENST00000516108 154 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 SNORA31.6-201ENST00000516241 130 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 RNU1-107P-201ENST00000516617 154 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 IGLVIV-65-201ENST00000517313 360 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 AC023632.4-201ENST00000517783 191 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 AC091144.1-201ENST00000519573 138 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 MIR5701-3-201ENST00000578890 82 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 MIR5701-1-201ENST00000585138 82 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 AC008739.3-201ENST00000603262 127 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 AC024220.1-201ENST00000603675 484 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 MIR5701-2-201ENST00000615634 82 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 SNX18P1Y-201ENST00000616231 511 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 AL022401.1-201ENST00000619498 108 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 U3.53-201ENST00000628922 216 ntBASIC5.72□□□□□ -1.49
ZC3H4Q9UPT8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
ZC3H4Q9UPT8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZC3H4Q9UPT8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
ZC3H4Q9UPT8 GVINP1-202ENST00000531871 7271 ntBASIC5.71□□□□□ -1.49
ZC3H4Q9UPT8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ZC3H4Q9UPT8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AL672167.1-204ENST00000641875 3017 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC106871.1-201ENST00000568324 3102 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 UBE2L2-201ENST00000254302 429 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 MIR335-201ENST00000362173 94 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-525P-201ENST00000363685 104 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-595P-201ENST00000363944 107 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.200-201ENST00000364018 102 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-76P-201ENST00000384060 104 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 Z98745.1-201ENST00000402553 494 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-628P-201ENST00000410675 107 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.793-201ENST00000411222 111 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RPL7AP25-201ENST00000423357 805 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC091286.1-201ENST00000431233 461 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RPL19P16-201ENST00000433839 588 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC026784.1-201ENST00000507986 352 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 MIR3133-201ENST00000583157 78 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC004852.3-201ENST00000614131 326 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 RLIMP1-201ENST00000339626 1680 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 AC104260.2-201ENST00000623551 3497 ntBASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZC3H4Q9UPT8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 SPRR2C-201ENST00000290702 219 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-37P-201ENST00000362692 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 SNORD46.1-201ENST00000364139 104 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-11P-201ENST00000364234 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.269-201ENST00000364685 89 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-7-201ENST00000364784 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-8-201ENST00000365467 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-25P-201ENST00000383873 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-1-201ENST00000383898 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-48P-201ENST00000384161 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-36P-201ENST00000384172 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-4P-201ENST00000384205 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-5P-201ENST00000384238 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-3P-201ENST00000384314 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-16P-201ENST00000384385 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-15P-201ENST00000384534 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-2-201ENST00000384627 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-29P-201ENST00000384637 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-9-201ENST00000384776 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNA5SP372-201ENST00000390836 115 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-882P-201ENST00000391025 103 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RNA5SP494-201ENST00000410653 129 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AC087650.1-201ENST00000431445 468 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 HSPD1P21-201ENST00000436541 245 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 RN7SL558P-201ENST00000497468 299 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AC074250.1-201ENST00000511117 192 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 SNORA31.22-201ENST00000517204 135 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AC093023.1-201ENST00000547375 507 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 MIR4472-2-201ENST00000582069 67 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms