Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RNU6-1249P-201ENST00000363237 111 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.183-201ENST00000363882 113 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 SNORD27-201ENST00000363981 72 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RNU6-76P-201ENST00000384060 104 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 MIR195-201ENST00000385194 87 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RNU6-1203P-201ENST00000410703 110 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RNU2-25P-201ENST00000411041 191 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 MTCO3P19-201ENST00000415864 321 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RPL23AP25-201ENST00000430973 463 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RANP8-201ENST00000444720 713 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 NDUFB1P2-201ENST00000449477 176 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RNU5B-3P-201ENST00000516601 115 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AP006289.1-201ENST00000538089 277 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC126177.3-201ENST00000551839 688 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC130289.1-201ENST00000577321 73 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 RPS29P30-201ENST00000600975 111 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 BDH2P1-201ENST00000602288 736 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC131238.1-201ENST00000617135 328 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AL353748.2-201ENST00000622148 471 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 AP001273.1-201ENST00000624493 3152 ntBASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
AP4E1Q9UPM8 ZNF299P-201ENST00000406845 1804 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RNA5SP52-201ENST00000362448 134 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RNU6-338P-201ENST00000383888 105 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RNU6-933P-201ENST00000384424 107 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 SNORA19-201ENST00000384737 128 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RNU6-882P-201ENST00000391025 103 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RNU2-71P-201ENST00000411395 189 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 MYL8P-204ENST00000431574 518 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AL392103.1-201ENST00000447000 198 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AL162591.2-201ENST00000449634 317 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AC012671.1-201ENST00000451912 203 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 PRELID3BP1-201ENST00000457142 540 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RPL23AP65-201ENST00000475608 468 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AC022493.1-201ENST00000492984 337 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AF186190.1-201ENST00000517470 480 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AC022790.1-201ENST00000522872 204 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 RPL21P7-201ENST00000557463 483 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AC010900.2-201ENST00000604508 210 ntBASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.67□□□□□ -1.66
AP4E1Q9UPM8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC079741.1-201ENST00000321498 212 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.84-201ENST00000363011 104 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 RNU1-20P-201ENST00000363314 162 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 SNORA36C-201ENST00000384289 132 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 MIR628-201ENST00000385229 95 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 RNA5SP36-201ENST00000410197 133 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.592-201ENST00000410274 109 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC092423.1-201ENST00000430165 186 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC004383.1-201ENST00000438135 289 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AL590399.6-201ENST00000446396 307 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 RPL7P5-201ENST00000471472 736 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 HMGN1P11-201ENST00000508668 303 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 RNA5SP360-201ENST00000516555 118 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms