Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC005005.2-201ENST00000420779 380 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 HMGN2P38-201ENST00000423806 265 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 MED14P1-201ENST00000430517 648 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC104982.1-201ENST00000478775 574 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 RPL9P6-201ENST00000492764 598 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC098591.2-201ENST00000510152 315 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 NRON-201ENST00000517270 370 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 HMGN1P28-201ENST00000521340 364 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.58□□□□□ -2
CTNNA3Q9UI47 LRRC37A5P-203ENST00000580181 585 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 VN1R83P-201ENST00000595685 445 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 AP000403.1-201ENST00000603349 851 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC012640.5-201ENST00000623897 319 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 AC106858.1-201ENST00000637497 429 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 LINC02211-204ENST00000642024 1070 ntBASIC2.58□□□□□ -2
CTNNA3Q9UI47 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 Y_RNA.238-201ENST00000364441 102 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 RPL23AP29-201ENST00000397284 453 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AL590084.1-201ENST00000407885 387 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 TIMM9P2-201ENST00000419324 266 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 USP9YP11-201ENST00000427537 717 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 MTATP6P7-201ENST00000453315 681 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AL121769.1-201ENST00000469473 401 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 AC104090.1-201ENST00000506341 1171 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AP005902.1-201ENST00000521358 186 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 AL132657.2-201ENST00000564417 358 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.57□□□□□ -2
CTNNA3Q9UI47 DDX43P2-201ENST00000604753 1354 ntBASIC2.57□□□□□ -2
CTNNA3Q9UI47 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CTNNA3Q9UI47 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 HMGB1P11-201ENST00000413899 637 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 CYCSP48-201ENST00000417124 323 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 MORF4L1P6-201ENST00000418771 268 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 BX322784.1-201ENST00000455793 1077 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 AL049777.1-201ENST00000622740 518 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 AP002791.1-201ENST00000623291 381 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.56□□□□□ -2
CTNNA3Q9UI47 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CTNNA3Q9UI47 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CTNNA3Q9UI47 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTNNA3Q9UI47 RNA5SP247-201ENST00000411181 105 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 BX119904.4-201ENST00000424402 301 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC090255.1-201ENST00000495779 349 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 CKS1BP2-201ENST00000497342 240 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 AL359212.1-201ENST00000556608 614 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 MTND3P13-201ENST00000574391 343 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 AL357094.1-201ENST00000603845 844 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AL121917.1-203ENST00000605534 577 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC010133.1-201ENST00000615809 842 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC009268.2-201ENST00000621925 457 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.55□□□□□ -2
CTNNA3Q9UI47 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC013437.2-201ENST00000639587 677 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
CTNNA3Q9UI47 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
CTNNA3Q9UI47 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.54□□□□□ -2
CTNNA3Q9UI47 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTNNA3Q9UI47 AL161781.1-201ENST00000354277 403 ntBASIC2.54□□□□□ -2
CTNNA3Q9UI47 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTNNA3Q9UI47 Y_RNA.408-201ENST00000383987 102 ntBASIC2.54□□□□□ -2
CTNNA3Q9UI47 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
CTNNA3Q9UI47 AL079342.1-201ENST00000401460 267 ntBASIC2.54□□□□□ -2
CTNNA3Q9UI47 RNA5SP338-201ENST00000410495 85 ntBASIC2.54□□□□□ -2
CTNNA3Q9UI47 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTNNA3Q9UI47 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms