Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNORA40C-201ENST00000391285 128 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 MIR888-201ENST00000401186 77 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 POLHP1-201ENST00000411806 470 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AL353572.1-201ENST00000442490 417 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 MTND4P18-201ENST00000447010 465 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNU7-167P-201ENST00000459160 62 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RNU6-1208P-201ENST00000459588 107 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC034236.1-201ENST00000469891 373 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RPS29P20-201ENST00000489592 171 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.654-201ENST00000497848 106 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 SNORA31.1-201ENST00000515993 133 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 SNORA31.5-201ENST00000516190 133 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC118273.2-201ENST00000532092 465 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 CYCSP29-201ENST00000533731 318 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC023050.3-201ENST00000541142 333 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 MIR548S-201ENST00000581352 82 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 AL391261.4-201ENST00000616012 481 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 U6.99-201ENST00000637524 83 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 MIR492-201ENST00000638676 116 ntBASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
LIN7CQ9NUP9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 MIR412-201ENST00000362142 91 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.88-201ENST00000363029 99 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU1-73P-201ENST00000383971 164 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU6-658P-201ENST00000384606 106 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AL022722.2-201ENST00000402519 180 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AL162578.1-201ENST00000406202 378 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC098614.2-201ENST00000426040 255 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AL358472.1-201ENST00000431295 329 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 HMGB1P37-201ENST00000439613 609 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 MTATP6P23-201ENST00000440153 476 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 BRK1P2-201ENST00000442875 223 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AL583843.1-201ENST00000456070 346 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC083904.1-201ENST00000487828 231 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 TBCAP3-201ENST00000512475 312 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU1-86P-201ENST00000516108 154 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU6-189P-201ENST00000516120 101 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU1-107P-201ENST00000516617 154 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 MIR2114-201ENST00000516645 80 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RNU6-703P-201ENST00000516946 107 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 RPL7P20-201ENST00000520308 745 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC090115.3-201ENST00000553218 849 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 MTCO3P23-201ENST00000561363 289 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 VN1R80P-201ENST00000597126 338 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AC244505.7-201ENST00000599675 272 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 AL590392.1-201ENST00000604960 446 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
LIN7CQ9NUP9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 RNY3P14-201ENST00000384309 102 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 RPL32P23-201ENST00000397237 405 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC138393.2-201ENST00000414742 246 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL353621.1-201ENST00000418219 243 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL353729.1-201ENST00000425044 720 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 NEK4P1-201ENST00000433383 879 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 VN1R34P-201ENST00000447387 883 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms