Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MTCO1P21-201ENST00000416634 589 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 RPL31P12-201ENST00000422587 358 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 CALM2P2-201ENST00000428512 440 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC018644.1-201ENST00000429934 551 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL591704.1-201ENST00000432574 275 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC073063.1-201ENST00000434352 607 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL714022.1-201ENST00000439897 151 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 SRRM1P2-201ENST00000464531 1192 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 MRPS17P3-201ENST00000465453 385 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC114786.4-201ENST00000508771 728 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC010265.1-201ENST00000513509 211 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 RNA5SP503-201ENST00000517047 117 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 SUB1P1-201ENST00000524415 382 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 EIF1P4-201ENST00000572664 335 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AL670379.4-201ENST00000605279 254 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC012409.4-201ENST00000612923 249 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
BRF2Q9HAW0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
BRF2Q9HAW0 ZNF680P1-201ENST00000436625 1469 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 RNU6-1287P-201ENST00000362914 107 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 RNU6-1060P-201ENST00000384664 107 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 MTCO3P40-201ENST00000392516 676 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 MTCO2P19-201ENST00000427513 598 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 GOT2P5-201ENST00000433995 546 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 DNAJC19P4-201ENST00000440115 345 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 RPS29P15-201ENST00000458329 171 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC128713.1-201ENST00000471495 306 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC233702.1-201ENST00000482905 502 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC026403.1-201ENST00000518938 295 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC016957.1-201ENST00000534895 309 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 NACAP3-201ENST00000552100 481 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC024619.4-201ENST00000580924 316 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL391646.1-201ENST00000603860 190 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC139792.3-201ENST00000623525 224 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL157786.1-207ENST00000627771 695 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AL034408.1-202ENST00000636088 415 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 Z99571.1-201ENST00000636677 394 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF2Q9HAW0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
BRF2Q9HAW0 AC027514.1-201ENST00000588561 1603 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 Y_RNA.159-201ENST00000363674 87 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RNU6-884P-201ENST00000363889 107 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RNU6-61P-201ENST00000365528 109 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 Y_RNA.409-201ENST00000383990 98 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 MIR554-201ENST00000384874 96 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RNU6-192P-201ENST00000391253 100 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms