Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC046134.1-201ENST00000514454 666 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.49□□□□□ -1.85
CDT1Q9H211 RNU6-1281P-201ENST00000516223 105 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RN7SKP60-201ENST00000516985 239 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.49□□□□□ -1.85
CDT1Q9H211 FAM60DP-201ENST00000524174 632 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 SNRPGP16-201ENST00000533275 226 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC011602.1-201ENST00000546484 331 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC128657.1-201ENST00000549459 145 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC034105.3-201ENST00000565294 442 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.49□□□□□ -1.85
CDT1Q9H211 FGF7P1-201ENST00000582820 288 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AF038458.1-201ENST00000588406 262 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC060780.3-201ENST00000589464 80 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 GLUD1P4-201ENST00000590914 418 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AL117336.2-201ENST00000602435 335 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RMST_3.1-201ENST00000611651 109 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 uc_338.25-201ENST00000613756 156 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC024614.3-201ENST00000637860 256 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDT1Q9H211 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CDT1Q9H211 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDT1Q9H211 MTND4P12-201ENST00000498999 1377 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC092326.2-201ENST00000624772 1561 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 RNU1-39P-201ENST00000383897 165 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 RNU2-36P-201ENST00000410361 191 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 RNU2-41P-201ENST00000410991 178 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 RHEBP3-201ENST00000411920 351 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AL606489.2-201ENST00000433886 234 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 MTCO3P45-201ENST00000443036 613 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.48□□□□□ -1.85
CDT1Q9H211 SNRPGP6-201ENST00000451124 220 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 snoU13.4-201ENST00000458916 104 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC008481.1-201ENST00000463278 396 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC010631.1-201ENST00000474150 156 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC006445.1-201ENST00000491925 405 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 MTCO2P30-201ENST00000503662 364 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 VN1R104P-201ENST00000505115 1009 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC114786.4-201ENST00000508771 728 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 RNU6-835P-201ENST00000516974 104 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AF235103.2-201ENST00000525753 346 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC011979.2-201ENST00000527568 352 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC004024.1-201ENST00000549244 247 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 Z84480.1-201ENST00000605131 311 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC012443.1-201ENST00000605605 231 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 XIST_intron.1-201ENST00000619444 68 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AL360181.4-201ENST00000621752 134 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AC010338.1-201ENST00000621823 717 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDT1Q9H211 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.48□□□□□ -1.85
CDT1Q9H211 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDT1Q9H211 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 AL672296.1-201ENST00000427780 2158 ntBASIC3.48□□□□□ -1.85
CDT1Q9H211 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDT1Q9H211 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDT1Q9H211 RPS4XP5-202ENST00000449995 1334 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 Y_RNA.61-201ENST00000362835 102 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 RNU6-1158P-201ENST00000391167 107 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 RPS4XP8-201ENST00000402039 771 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AL136372.1-201ENST00000403060 228 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AL356776.1-201ENST00000406574 447 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 RNA5SP129-201ENST00000410276 118 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 OR51A5P-201ENST00000415429 942 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 GPR143P-201ENST00000434155 205 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 BX679664.1-201ENST00000434429 253 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms