Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AL034351.1-201ENST00000605288 668 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 PRR13P7-201ENST00000605538 430 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC100812.1-201ENST00000607622 580 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AL450472.3-201ENST00000615578 367 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 HMGB1P24-202ENST00000615653 685 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC005592.1-201ENST00000566527 1640 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF38Q9H0F5 RNA5SP130-201ENST00000364431 114 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 SNORA7.2-201ENST00000364446 145 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RNA5SP513-201ENST00000364648 118 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.307-201ENST00000365022 117 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RNA5SP283-201ENST00000365604 119 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.428-201ENST00000384078 102 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RPS4XP7-201ENST00000406274 780 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RNU4-65P-201ENST00000410473 140 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RPL7P10-201ENST00000417407 739 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC004552.1-201ENST00000419089 348 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC079780.1-201ENST00000428259 207 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC004866.2-201ENST00000438285 481 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 HSFY6P-201ENST00000445573 403 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL359073.1-201ENST00000448036 403 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RPS24P6-201ENST00000452670 400 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RNU7-167P-201ENST00000459160 62 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RPS26P3-201ENST00000470205 348 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC090543.2-201ENST00000483963 348 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC004057.1-201ENST00000485827 348 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC104564.1-201ENST00000493028 407 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RNA5SP384-201ENST00000516615 116 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 SNORD116.3-201ENST00000517176 78 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC090151.1-201ENST00000520784 730 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AP005902.1-201ENST00000521358 186 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 OR8R1P-201ENST00000543943 764 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL109918.3-201ENST00000603072 338 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AC092447.9-201ENST00000603395 144 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL670379.6-201ENST00000603753 252 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL670379.1-201ENST00000604752 252 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL670379.5-201ENST00000605253 252 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL670379.8-201ENST00000605353 252 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 AL670379.7-201ENST00000605823 252 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 SNHG22-203ENST00000617833 660 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 U2.1-201ENST00000618978 145 ntBASIC4.4□□□□□ -1.71
RNF38Q9H0F5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF38Q9H0F5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC091812.1-201ENST00000432235 1948 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.2-201ENST00000362330 96 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNU6-490P-201ENST00000362985 107 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNU6-95P-201ENST00000384697 107 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNU2-3P-201ENST00000410144 191 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RPL23AP50-201ENST00000434149 455 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 GAPDHP27-201ENST00000447427 1020 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 PCNPP5-201ENST00000452246 481 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RPL23AP65-201ENST00000475608 468 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 VN1R105P-201ENST00000486595 910 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC104164.2-201ENST00000496953 495 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 MLLT10P2-201ENST00000506434 249 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 RNU2-69P-201ENST00000516061 100 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC106785.1-201ENST00000565935 262 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC005357.1-201ENST00000588399 301 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC004696.1-201ENST00000614345 607 ntBASIC4.39□□□□□ -1.71
RNF38Q9H0F5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF38Q9H0F5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms