Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX3Q99909 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.68□□□□□ -1.98
SSX3Q99909 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSX3Q99909 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SSX3Q99909 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
SSX3Q99909 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX3Q99909 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSX3Q99909 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSX3Q99909 FGF7P2-201ENST00000332473 296 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RNU5E-1-201ENST00000362477 120 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 U3.4-201ENST00000363352 213 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RNU6-288P-201ENST00000363690 104 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RNU4-1-201ENST00000363925 141 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 SNORA9-201ENST00000384215 133 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 MIR483-201ENST00000385070 76 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AL513475.1-201ENST00000406602 315 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 HMGN1P14-201ENST00000412459 517 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC009518.2-201ENST00000418056 731 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 ELOCP4-201ENST00000420090 333 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC090960.1-201ENST00000421072 306 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC007283.2-201ENST00000424739 197 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC093106.2-201ENST00000428212 385 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX3Q99909 MTND4P25-201ENST00000441039 533 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 MTND6P13-201ENST00000443510 523 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 snoU109.1-201ENST00000459339 135 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC126182.1-201ENST00000478134 357 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AIG1P1-201ENST00000503376 148 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 NDUFB4P2-201ENST00000509515 391 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 SCARNA17.1-201ENST00000516211 143 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 SCARNA17.2-201ENST00000516334 143 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RNA5SP165-201ENST00000517142 115 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RN7SKP57-201ENST00000517248 293 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SSX3Q99909 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 MIR5680-201ENST00000577577 84 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX3Q99909 Z94722.1-201ENST00000604328 474 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC007363.1-201ENST00000604736 620 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC013562.2-201ENST00000611632 603 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AC073114.1-201ENST00000612027 490 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 SCARNA17.4-201ENST00000614296 143 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX3Q99909 AC022079.1-201ENST00000621546 602 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 AL603839.4-201ENST00000624658 1005 ntBASIC2.67□□□□□ -1.98
SSX3Q99909 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SSX3Q99909 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSX3Q99909 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX3Q99909 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SSX3Q99909 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSX3Q99909 HSPE1P11-201ENST00000339579 310 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSX3Q99909 SNORD56.2-201ENST00000363242 71 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 SMIM11P1-201ENST00000369586 178 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SSX3Q99909 RNU6-14P-201ENST00000384630 106 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 SNORA40.3-201ENST00000390964 122 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RPL23AP32-201ENST00000395315 459 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RNU2-68P-201ENST00000410878 191 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RPS3AP3-201ENST00000411933 242 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AL356968.1-201ENST00000416622 474 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SSX3Q99909 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX3Q99909 HMGB3P12-201ENST00000438745 556 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 PGBD4P3-201ENST00000440731 581 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 ST13P20-201ENST00000447996 1065 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSX3Q99909 AL033528.1-201ENST00000453780 140 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX3Q99909 RNA5SP269-201ENST00000459032 137 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RNU6-953P-201ENST00000459154 107 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 RPL21P13-201ENST00000488305 481 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.66□□□□□ -1.98
SSX3Q99909 RNU6-826P-201ENST00000516827 104 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.66□□□□□ -1.98
SSX3Q99909 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX3Q99909 AC012414.6-201ENST00000568241 401 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX3Q99909 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX3Q99909 NRBF2P5-201ENST00000603087 788 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC012119.1-201ENST00000603184 222 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AL358072.1-201ENST00000604156 575 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC104763.2-201ENST00000604179 382 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC073657.2-201ENST00000605661 303 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 OR2AS2P-201ENST00000606902 342 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 MIR7112-201ENST00000616126 65 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 AC091953.5-201ENST00000622919 233 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms