Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL669831.1-202ENST00000428504 417 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AL117339.2-201ENST00000430475 180 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 GPM6BP2-201ENST00000432046 144 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 GPM6BP1-201ENST00000446387 144 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC090096.1-201ENST00000489168 390 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AP001086.1-201ENST00000494882 321 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 RPS27AP13-201ENST00000498403 237 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 RNU4-60P-201ENST00000517239 135 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC018630.1-201ENST00000541376 925 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC012182.1-201ENST00000570133 895 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC174048.1-201ENST00000603389 144 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC091167.4-201ENST00000605079 184 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AL355802.3-201ENST00000607571 545 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC022893.3-201ENST00000607665 437 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC040896.1-201ENST00000613819 479 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AL138726.1-201ENST00000614873 333 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 SCARNA15.3-201ENST00000626315 122 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 SCARNA4.1-201ENST00000628597 123 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHAMP1Q96JM3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 HSPA8P4-201ENST00000511877 1920 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 Y_RNA.197-201ENST00000364004 102 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 RNA5SP130-201ENST00000364431 114 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AL139397.2-201ENST00000404529 772 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 Z92545.1-201ENST00000411782 234 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC092809.3-201ENST00000415453 231 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 RPL32P28-201ENST00000443577 397 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC104058.1-201ENST00000448028 297 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 MRPS31P2-201ENST00000451581 518 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC130509.1-201ENST00000464158 433 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 VN1R105P-201ENST00000486595 910 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 RAC1P2-201ENST00000511164 579 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 SNORA31.3-201ENST00000516029 96 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 RNA5SP179-201ENST00000517284 121 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC007151.1-201ENST00000572774 483 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC006116.10-201ENST00000591836 581 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AL138889.2-201ENST00000603883 242 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AL670379.4-201ENST00000605279 254 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC098657.3-201ENST00000620434 263 ntBASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHAMP1Q96JM3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 Y_RNA.31-201ENST00000362574 102 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AL360182.1-201ENST00000397433 468 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RNU4-6P-201ENST00000410804 122 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RPS29P7-201ENST00000439662 171 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC093303.1-201ENST00000514549 295 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RNU2-69P-201ENST00000516061 100 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 Y_RNA.689-201ENST00000516589 107 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 RNU6-1069P-201ENST00000516612 133 ntBASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.49□□□□□ -1.69
CHAMP1Q96JM3 AC008489.1-201ENST00000524271 483 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms