Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC083904.1-201ENST00000487828 231 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC026402.1-201ENST00000513642 170 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 SNORA19.2-201ENST00000516013 114 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RNU6-277P-201ENST00000516272 106 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC093027.1-201ENST00000546698 429 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 OR11H5P-201ENST00000554039 926 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC026464.5-201ENST00000562497 722 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC010928.3-201ENST00000587712 541 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC044792.1-201ENST00000593294 196 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC007687.1-201ENST00000602704 304 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC009570.1-201ENST00000609599 745 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 MIR1302-1-201ENST00000637932 143 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AC099654.10-201ENST00000640395 161 ntBASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4AQ8WYN0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 MIR30E-201ENST00000362104 92 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RNU4-79P-201ENST00000362764 141 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP44-201ENST00000363602 316 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AP002088.1-201ENST00000382740 395 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 CISD1P1-201ENST00000393907 327 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP263-201ENST00000411194 309 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP140-201ENST00000411196 284 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RNA5SP111-201ENST00000411386 101 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 POLHP1-201ENST00000411806 470 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 DBIP2-201ENST00000419076 262 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC092451.1-201ENST00000480211 153 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP21-201ENST00000516503 220 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 SNORA70.18-201ENST00000516696 98 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 MIR2116-201ENST00000517221 80 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AP001804.3-201ENST00000525146 880 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 SNRPGP16-201ENST00000533275 226 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 OR8R1P-201ENST00000543943 764 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AL355375.2-201ENST00000574825 175 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 MIR4425-201ENST00000580572 84 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC092747.3-201ENST00000603769 301 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AP003400.5-201ENST00000624827 617 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
ATG4AQ8WYN0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AP001350.1-201ENST00000601906 1524 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC007685.1-201ENST00000329806 452 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 DEFB108F-201ENST00000344638 222 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 RNU6-288P-201ENST00000363690 104 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AL513331.1-201ENST00000411908 397 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC080125.1-201ENST00000414888 684 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 HMGB1P27-201ENST00000431429 603 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AL591704.1-201ENST00000432574 275 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AL591212.2-201ENST00000433923 257 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 S100A11P1-201ENST00000477525 312 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 RPL21P93-201ENST00000480465 489 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms