Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 HMGB1P41-201ENST00000520234 440 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AP006245.1-201ENST00000522549 120 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 PSMA2P1-201ENST00000526365 646 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 MIR4513-201ENST00000581077 86 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AC011712.1-201ENST00000588959 234 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 RMST_8.1-201ENST00000610287 165 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 AL360181.4-201ENST00000621752 134 ntBASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.97□□□□□ -1.77
ATRIPQ8WXE1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
ATRIPQ8WXE1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATRIPQ8WXE1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 Y_RNA.72-201ENST00000362894 103 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 Y_RNA.255-201ENST00000364581 97 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 RNU2-36P-201ENST00000410361 191 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 RNA5SP107-201ENST00000411358 122 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 PDCL2P1-201ENST00000419302 352 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 YPEL5P1-201ENST00000419731 367 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL158156.1-201ENST00000422509 473 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 DUTP6-201ENST00000425573 462 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 MTND1P14-201ENST00000427400 950 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 RPL35AP22-201ENST00000436855 335 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL356010.1-201ENST00000456364 102 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 SNORD27.1-201ENST00000516319 72 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 IGHV3-76-201ENST00000522465 295 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AC011979.2-201ENST00000527568 352 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 AL121757.2-201ENST00000611223 313 ntBASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.96□□□□□ -1.78
ATRIPQ8WXE1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AL079305.1-201ENST00000623159 3008 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 Y_RNA.142-201ENST00000363491 102 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RNU4-48P-201ENST00000365559 182 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RNU6-767P-201ENST00000384132 107 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 Y_RNA.509-201ENST00000384506 99 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RNU6-606P-201ENST00000384721 111 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC096664.2-201ENST00000411843 406 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 SSXP9-201ENST00000417503 292 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AL137014.1-201ENST00000420490 1226 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC073415.1-201ENST00000449240 153 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 BX510359.1-201ENST00000456973 237 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RPS15AP36-201ENST00000492022 382 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RN7SKP57-201ENST00000517248 293 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC103783.1-201ENST00000520506 373 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 SNORD84-203ENST00000584275 78 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 MIR3922-201ENST00000585192 84 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AC090617.10-201ENST00000624308 134 ntBASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATRIPQ8WXE1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 HSPE1P11-201ENST00000339579 310 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 MIR30E-201ENST00000362104 92 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 RNU6-845P-201ENST00000362578 103 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 RNU4-73P-201ENST00000363164 141 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 Y_RNA.157-201ENST00000363638 102 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 SNORA62.1-201ENST00000364287 154 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 RNU6-641P-201ENST00000384006 107 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 MT-TD-201ENST00000387419 68 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 RNU6-332P-201ENST00000391193 108 ntBASIC3.94□□□□□ -1.78
ATRIPQ8WXE1 AL109755.1-201ENST00000401791 649 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms