Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 HMGN2P13-201ENST00000476476 274 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 RNA5SP471-201ENST00000516971 106 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 HSPE1P20-201ENST00000538133 289 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AC090517.1-201ENST00000569307 266 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 VN1R91P-201ENST00000594377 169 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 AL121917.1-203ENST00000605534 577 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 U8.8-201ENST00000365399 135 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RNU1-44P-201ENST00000384453 163 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AL513475.1-201ENST00000406602 315 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 U3.42-201ENST00000408746 214 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 C4BPAP2-201ENST00000428434 478 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RPS3AP46-201ENST00000448352 682 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 OR2AQ1P-201ENST00000451972 200 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RPS15AP34-201ENST00000487776 387 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 IGLV2-34-201ENST00000490007 283 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RNU6-1315P-201ENST00000517187 99 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 TOMM20P2-201ENST00000540082 421 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RN7SL690P-201ENST00000582087 240 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AC006023.2-201ENST00000609916 167 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 FP236240.3-201ENST00000623061 327 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 AL512643.1-201ENST00000635735 524 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 OR51H2P-202ENST00000641424 3046 ntBASIC4.2□□□□□ -1.74
NUP43Q8NFH3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP43Q8NFH3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 OR56A5-201ENST00000340110 738 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 SNORD113.2-201ENST00000364166 89 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 Y_RNA.533-201ENST00000384596 114 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MIR625-201ENST00000385047 85 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AL513331.1-201ENST00000411908 397 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AL162591.2-201ENST00000449634 317 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 RNU7-169P-201ENST00000459456 61 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC087588.1-201ENST00000462203 316 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC110792.1-201ENST00000491826 472 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 HMGN1P11-201ENST00000508668 303 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MIR892C-201ENST00000516410 77 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AP001781.1-201ENST00000530977 207 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC004584.2-201ENST00000570407 410 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MIR1244-1-201ENST00000612829 85 ntBASIC4.19□□□□□ -1.74
NUP43Q8NFH3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP43Q8NFH3 MIR1244-3-201ENST00000635744 85 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms