Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 RNU2-9P-201ENST00000410194 145 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 RNA5SP111-201ENST00000411386 101 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL158156.1-201ENST00000422509 473 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 DPPA2P1-201ENST00000428060 556 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 TRBV1-201ENST00000476502 284 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 SUMO2P6-201ENST00000505273 288 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 RNU1-103P-201ENST00000516502 125 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC022634.1-201ENST00000520765 532 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC011611.1-201ENST00000552179 197 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC245505.1-201ENST00000556398 224 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 HMGN2P15-201ENST00000585707 270 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AL022154.1-201ENST00000604698 785 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC087241.4-201ENST00000612441 480 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AP001486.3-201ENST00000615334 372 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 uc_338.11-201ENST00000619132 160 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 U2.21-201ENST00000637295 81 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 AC032011.1-201ENST00000611703 1549 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM4Q86VH4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 OR51A5P-201ENST00000415429 942 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL160275.3-201ENST00000423876 471 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL353729.1-201ENST00000425044 720 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL589823.1-201ENST00000429577 183 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC097713.2-201ENST00000430199 356 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC005019.1-201ENST00000436455 431 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC003071.1-201ENST00000451219 789 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 MTATP6P7-201ENST00000453315 681 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 EIF4EP3-201ENST00000498782 656 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC104806.1-201ENST00000508720 308 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 RNU6-685P-201ENST00000517088 95 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 OR5BN1P-201ENST00000532955 829 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 MIR1273C-201ENST00000578669 77 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC008521.1-201ENST00000587471 187 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AL670379.4-201ENST00000605279 254 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC024940.5-201ENST00000622889 474 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 AC005609.4-201ENST00000625071 447 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM4Q86VH4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 RNU6-778P-201ENST00000363269 103 ntBASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 SNORD115-7-201ENST00000365306 82 ntBASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM4Q86VH4 RNU6-658P-201ENST00000384606 106 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms