Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC007785.2-201ENST00000598627 1916 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RNA5SP505-201ENST00000364748 108 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 SNORA53-201ENST00000391141 249 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RNU6-918P-201ENST00000391219 106 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 GLULP6-201ENST00000399502 913 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL033519.2-201ENST00000403958 392 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RNA5SP113-201ENST00000410486 84 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RNU4-78P-201ENST00000410940 126 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 BMS1P22-201ENST00000414726 313 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 BX679664.1-201ENST00000434429 253 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 PRDX3P3-201ENST00000447765 522 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 HSPE1P25-201ENST00000455484 251 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RN7SL738P-201ENST00000470264 297 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RPL30P10-201ENST00000488148 337 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC091144.1-201ENST00000519573 138 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 MIR4270-201ENST00000581799 70 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 NF1P5-201ENST00000588287 448 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC006077.1-201ENST00000604746 343 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC123768.4-201ENST00000616244 701 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AC007529.1-201ENST00000418574 2178 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4DQ86TL0 AL136164.3-201ENST00000624429 3978 ntBASIC4.28□□□□□ -1.72
ATG4DQ86TL0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 LINC01109-201ENST00000603837 3081 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC000123.3-201ENST00000624029 4975 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AL672167.1-205ENST00000641112 3080 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RNU6-923P-201ENST00000364753 107 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.418-201ENST00000384029 102 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RNU6-1168P-201ENST00000390831 104 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 MIR190B-201ENST00000401119 79 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC092447.6-201ENST00000414578 210 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 U8.22-201ENST00000459141 133 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RNU6-953P-201ENST00000459154 107 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RPL23AP2-201ENST00000471227 466 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC015912.2-201ENST00000571053 181 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RN7SL52P-201ENST00000584271 284 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC008745.1-201ENST00000604064 271 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AL391358.1-201ENST00000605342 190 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC240442.1-201ENST00000616055 283 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RN7SL722P-201ENST00000617780 284 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 RN7SL565P-201ENST00000618246 284 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 AC097372.5-201ENST00000623665 376 ntBASIC4.27□□□□□ -1.73
ATG4DQ86TL0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4DQ86TL0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RNU6-1035P-201ENST00000384477 107 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RPL23AP36-201ENST00000413895 458 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms