Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-1003P-201ENST00000517099 105 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-111P-201ENST00000517179 105 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AP001804.3-201ENST00000525146 880 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 GTF2IP8-201ENST00000560687 584 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 MIR3942-201ENST00000585264 109 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC067852.4-201ENST00000590314 478 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 CKS1BP3-201ENST00000600888 237 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 BBIP1P1-201ENST00000602999 279 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 BCRP9-201ENST00000605312 388 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC078899.5-201ENST00000612475 178 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 AC134882.1-201ENST00000603738 1676 ntBASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHA9Q7RTU4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 NACAP2-201ENST00000318548 624 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNA5SP50-201ENST00000363731 107 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.483-201ENST00000384380 101 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-606P-201ENST00000384721 111 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 MIR7-3-201ENST00000384898 110 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RN7SKP158-201ENST00000410453 326 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 BX323014.1-201ENST00000412876 237 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RPL21P2-201ENST00000440049 481 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 GSTA11P-201ENST00000452866 669 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RPL30P15-201ENST00000457129 321 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 MED28P2-201ENST00000475771 317 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC015911.1-201ENST00000495111 156 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 FAM206BP-201ENST00000510179 541 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC097714.1-201ENST00000511272 1647 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 SNORA81.3-201ENST00000517283 198 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC090572.1-201ENST00000519251 160 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AP005435.4-201ENST00000529514 284 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC025260.1-201ENST00000548858 430 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AL356489.2-201ENST00000566968 3528 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC024614.2-201ENST00000577584 372 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 MIR3682-201ENST00000581338 84 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AF038458.1-201ENST00000588406 262 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-89P-201ENST00000606519 100 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 MIR98-201ENST00000606724 119 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AL022345.1-201ENST00000607292 135 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC004792.1-201ENST00000614523 137 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 U2.14-201ENST00000615943 113 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 AC127459.3-201ENST00000624328 466 ntBASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
BHLHA9Q7RTU4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 AC006020.1-201ENST00000420179 1854 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-450P-201ENST00000364654 107 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-98P-201ENST00000384173 107 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 Y_RNA.464-201ENST00000384282 110 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-310P-201ENST00000384655 107 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNVU1-14-201ENST00000384770 164 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 MIR514A2-201ENST00000385131 88 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 MIR514A3-201ENST00000385132 88 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 SNORD115.1-201ENST00000391109 76 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-493P-201ENST00000391321 108 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 AL591416.1-201ENST00000404015 867 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-101P-201ENST00000410323 104 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 RNU6-735P-201ENST00000410612 107 ntBASIC3.56□□□□□ -1.84
BHLHA9Q7RTU4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms