Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RPL35AP22-201ENST00000436855 335 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT40Q6A162 SNRPFP3-201ENST00000457792 225 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 SNORA25.17-201ENST00000517184 124 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC022790.1-201ENST00000522872 204 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AP005639.2-201ENST00000527592 928 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT40Q6A162 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRT40Q6A162 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRT40Q6A162 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.23□□□□□ -1.73
KRT40Q6A162 AC025946.2-201ENST00000603398 234 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AL670379.11-201ENST00000604059 253 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AL670379.10-201ENST00000604330 253 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AL670379.12-201ENST00000605291 253 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AL670379.9-201ENST00000605428 253 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 AL627309.6-201ENST00000606857 840 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT40Q6A162 uc_338.15-201ENST00000615470 191 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 SCARNA15.3-201ENST00000626315 122 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 SCARNA4.1-201ENST00000628597 123 ntBASIC4.23□□□□□ -1.73
KRT40Q6A162 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRT40Q6A162 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT40Q6A162 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRT40Q6A162 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT40Q6A162 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT40Q6A162 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT40Q6A162 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT40Q6A162 MFSD8-236ENST00000641509 4050 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT40Q6A162 RNU6-474P-201ENST00000384243 107 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 MIR135A2-201ENST00000384854 100 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT40Q6A162 UBE2FP1-201ENST00000416536 447 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT40Q6A162 RPL7P46-201ENST00000425129 740 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT40Q6A162 AC236972.2-201ENST00000434979 310 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT40Q6A162 SNORD97-201ENST00000459187 142 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 VN1R17P-201ENST00000472048 1090 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 RPL21P93-201ENST00000480465 489 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AC106872.2-201ENST00000494303 480 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.22□□□□□ -1.73
KRT40Q6A162 HMGN1P11-201ENST00000508668 303 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 KLHL2P1-201ENST00000508691 521 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT40Q6A162 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT40Q6A162 MIR2114-201ENST00000516645 80 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AC100870.1-201ENST00000522035 505 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT40Q6A162 AP003385.6-201ENST00000531603 374 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AL137161.1-201ENST00000532231 390 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.22□□□□□ -1.73
KRT40Q6A162 AL022345.1-201ENST00000607292 135 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 API5P2-201ENST00000397055 1498 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.22□□□□□ -1.73
KRT40Q6A162 EXOC5P1-201ENST00000510543 1969 ntBASIC4.22□□□□□ -1.73
KRT40Q6A162 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRT40Q6A162 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT40Q6A162 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
KRT40Q6A162 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KRT40Q6A162 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 RNU6-1284P-201ENST00000363701 100 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 Y_RNA.216-201ENST00000364205 93 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AL592114.1-201ENST00000403842 483 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 MTHFD2P2-201ENST00000407725 247 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 RPL21P24-201ENST00000413752 448 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 BTF3L4P3-201ENST00000418879 476 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AL162389.1-201ENST00000449233 177 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 RPL7P43-201ENST00000478876 753 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC012181.1-201ENST00000479895 423 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 Y_RNA.654-201ENST00000497848 106 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 RBBP4P6-201ENST00000508098 202 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC104806.1-201ENST00000508720 308 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC108078.2-201ENST00000510750 236 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC005741.1-201ENST00000511094 432 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 RN7SKP289-201ENST00000517244 295 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 MTND4P7-201ENST00000523876 130 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT40Q6A162 AL355812.1-201ENST00000603215 216 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms