Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU6-1252P-201ENST00000363054 104 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 SNORA73.2-201ENST00000364946 201 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.460-201ENST00000384255 102 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 RNU6-831P-201ENST00000384548 107 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 RNU6-550P-201ENST00000391057 101 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AL356057.2-201ENST00000403318 432 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 SNORA11-201ENST00000408789 128 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 PPP1R11P2-201ENST00000423543 382 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 GOT2P5-201ENST00000433995 546 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 HSPD1P21-201ENST00000436541 245 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 NEFMP1-201ENST00000443423 1006 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 PRPS1P1-201ENST00000445305 876 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 RPL23AP62-201ENST00000463396 453 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 RPL21P8-201ENST00000465083 535 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC104619.4-201ENST00000510773 249 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 GMPSP1-201ENST00000514075 579 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 RN7SKP256-201ENST00000517201 314 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 ANP32BP3-201ENST00000559213 706 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC006077.1-201ENST00000604746 343 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 CTHRC1P1-201ENST00000605383 469 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AC092807.2-201ENST00000609367 243 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 AL442067.2-201ENST00000614033 363 ntBASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AL645937.1-201ENST00000641739 1652 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 TPTE2P4-201ENST00000258589 1605 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AL139276.1-201ENST00000311910 1001 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 RNA5SP235-201ENST00000365411 114 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.419-201ENST00000384041 102 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 PTMAP5-201ENST00000393073 333 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 U3.39-201ENST00000408569 239 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 HMGB1P18-201ENST00000438801 619 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC007677.1-201ENST00000445757 515 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC233279.1-201ENST00000455300 423 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 RNU6-329P-201ENST00000459618 107 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 MTND4P17-201ENST00000470444 350 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 HMGN1P13-201ENST00000505795 138 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC091885.1-201ENST00000506658 268 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 CCDC34P1-201ENST00000507441 517 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 SNORD84-203ENST00000584275 78 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC008739.3-201ENST00000603262 127 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC007619.2-201ENST00000605743 379 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 DUSP12P1-201ENST00000612874 516 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 SDR42E1P2-201ENST00000614861 481 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 uc_338.11-201ENST00000619132 160 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC244205.2-202ENST00000635781 342 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AC119674.1-207ENST00000641355 633 ntBASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.100-201ENST00000363141 102 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 RNU6-288P-201ENST00000363690 104 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 RNU6-522P-201ENST00000364497 107 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 RNU4-46P-201ENST00000410818 138 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 HSPE1P1-201ENST00000421494 318 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AC024082.2-201ENST00000434771 238 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 RN7SL330P-201ENST00000469709 307 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 RPL23AP11-201ENST00000475260 469 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AC117522.3-201ENST00000507974 584 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 Y_RNA.701-201ENST00000516812 110 ntBASIC4.21□□□□□ -1.74
CCDC178Q5BJE1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms