Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 BNIP3P22-201ENST00000593399 556 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC012507.3-201ENST00000603556 477 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC122108.2-201ENST00000611946 526 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC38Q502W7 DUSP12P1-201ENST00000612874 516 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AL121772.2-201ENST00000614331 297 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC38Q502W7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC38Q502W7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC38Q502W7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 MTCO3P40-201ENST00000392516 676 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 MRPL50P2-201ENST00000416821 482 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 TIMM9P3-201ENST00000428659 274 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 OR2B8P-201ENST00000432841 938 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AL714022.1-201ENST00000439897 151 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 VN1R34P-201ENST00000447387 883 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AL356010.1-201ENST00000456364 102 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC091153.1-201ENST00000466297 402 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 RBBP4P6-201ENST00000508098 202 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 HMGN1P11-201ENST00000508668 303 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC098591.2-201ENST00000510152 315 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 RNU6-506P-201ENST00000516553 94 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 SNORA64.4-201ENST00000516632 81 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 RNU6-685P-201ENST00000517088 95 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AP003122.3-201ENST00000526316 255 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AP001893.2-201ENST00000526949 202 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC084851.1-201ENST00000529105 249 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 uc_338.11-201ENST00000619132 160 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC011155.2-201ENST00000623202 216 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC38Q502W7 MAPK10-362ENST00000641864 4484 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 MFSD8-233ENST00000641482 4860 ntBASIC3.58□□□□□ -1.84
CCDC38Q502W7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC38Q502W7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 SNORA4.3-201ENST00000365564 137 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC38Q502W7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 ELOCP23-201ENST00000452014 332 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC006512.1-201ENST00000468816 291 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 SUMO2P6-201ENST00000505273 288 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC104806.1-201ENST00000508720 308 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 RNA5SP385-201ENST00000515947 110 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 SNORA67.7-201ENST00000516664 135 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 RNA5SP503-201ENST00000517047 117 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 AL359880.1-201ENST00000621879 266 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AP003122.6-201ENST00000623831 495 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC38Q502W7 AC093010.3-201ENST00000570269 15214 ntBASIC3.57□□□□□ -1.84
CCDC38Q502W7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC38Q502W7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 FRG1CP-201ENST00000358464 769 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 RNU6-884P-201ENST00000363889 107 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 CISD1P1-201ENST00000393907 327 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AL353193.1-201ENST00000421444 268 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms