Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RPL7AP49-201ENST00000429522 581 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AL591438.1-201ENST00000433508 581 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 RPL23AP3-201ENST00000453844 468 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC234775.1-201ENST00000454247 670 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC073901.1-201ENST00000462471 408 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 RNU6-27P-201ENST00000516146 107 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 RN7SKP272-201ENST00000516988 232 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC022790.1-201ENST00000522872 204 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC055872.1-201ENST00000570978 278 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 MIR3667-201ENST00000581025 74 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 SAGE2P-201ENST00000420011 2126 ntBASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.47□□□□□ -1.53
CTC1Q2NKJ3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTC1Q2NKJ3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTC1Q2NKJ3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CTC1Q2NKJ3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.217-201ENST00000364214 105 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RNU6-211P-201ENST00000384047 107 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RNA5SP113-201ENST00000410486 84 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 CTSL3P-202ENST00000412179 788 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RPL23AP33-201ENST00000442301 452 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.641-201ENST00000459414 105 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RN7SL188P-201ENST00000469842 285 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RNU7-121P-201ENST00000516604 62 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 RPL23AP87-202ENST00000573039 466 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 AC108738.1-201ENST00000603703 237 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 AL451142.2-201ENST00000429076 2090 ntBASIC5.46□□□□□ -1.54
CTC1Q2NKJ3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 RNA5SP90-201ENST00000364801 99 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 MIR1250-201ENST00000408098 113 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 RN7SKP284-201ENST00000411002 343 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 POLR2KP2-201ENST00000438155 177 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 BX276092.4-201ENST00000452056 248 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 snoU109.4-201ENST00000458953 143 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 SNRPGP16-201ENST00000533275 226 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AK6P2-201ENST00000549020 471 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 MIR4716-201ENST00000579628 84 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 MIR4512-201ENST00000583257 77 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AL365440.1-201ENST00000436135 2167 ntBASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTC1Q2NKJ3 AC107027.3-201ENST00000565095 3473 ntBASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 AL731532.2-201ENST00000623542 1953 ntBASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 RNU6-827P-201ENST00000365553 106 ntBASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 RNA5SP332-201ENST00000391063 115 ntBASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 AC008065.1-201ENST00000428525 348 ntBASIC5.44□□□□□ -1.54
CTC1Q2NKJ3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms