Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B3Q15393 HMGB3P15-201ENST00000507326 574 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 RNU6-1153P-201ENST00000516760 105 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 Y_RNA.701-201ENST00000516812 110 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC023050.3-201ENST00000541142 333 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B3Q15393 EIF4BP1-201ENST00000554881 351 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B3Q15393 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC064836.2-201ENST00000609491 462 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.08□□□□□ -1.76
SF3B3Q15393 AC091925.2-201ENST00000625059 256 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SF3B3Q15393 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.07□□□□□ -1.76
SF3B3Q15393 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B3Q15393 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AC006504.1-201ENST00000562493 3666 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B3Q15393 AL359893.1-201ENST00000447628 1580 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SF3B3Q15393 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SF3B3Q15393 NACAP2-201ENST00000318548 624 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RNU6-600P-201ENST00000362524 99 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RNU5E-8P-201ENST00000363502 116 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RNVU1-3-201ENST00000364313 161 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 U3.11-201ENST00000364476 212 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RNU4-48P-201ENST00000365559 182 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B3Q15393 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SF3B3Q15393 RNU6-332P-201ENST00000391193 108 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B3Q15393 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AC073415.1-201ENST00000449240 153 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 MTND1P9-201ENST00000453775 944 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 GMFBP1-201ENST00000467831 427 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RNU6-27P-201ENST00000516146 107 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RN7SKP116-201ENST00000516902 319 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 PSMA2P1-201ENST00000526365 646 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.07□□□□□ -1.76
SF3B3Q15393 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AL137843.1-201ENST00000605078 385 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B3Q15393 AC005858.4-201ENST00000623191 700 ntBASIC4.07□□□□□ -1.76
SF3B3Q15393 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B3Q15393 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B3Q15393 OR4G1P-203ENST00000641984 1631 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 ZNF734P-201ENST00000419494 1534 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC017071.1-201ENST00000564407 2204 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
SF3B3Q15393 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B3Q15393 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 SNORA51.2-201ENST00000364595 132 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.06□□□□□ -1.76
SF3B3Q15393 SNORD51-201ENST00000384320 80 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AL356057.2-201ENST00000403318 432 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 Z98941.1-201ENST00000407764 100 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 RN7SKP32-201ENST00000410167 303 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 RNU6-1148P-201ENST00000410992 104 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.06□□□□□ -1.76
SF3B3Q15393 OR4K11P-201ENST00000431829 904 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B3Q15393 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.06□□□□□ -1.76
SF3B3Q15393 AC007677.1-201ENST00000445757 515 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 RPL7P12-201ENST00000446719 750 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.06□□□□□ -1.76
SF3B3Q15393 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.06□□□□□ -1.76
SF3B3Q15393 NARSP2-201ENST00000518524 679 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC105029.1-201ENST00000520250 669 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC011979.2-201ENST00000527568 352 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC093027.1-201ENST00000546698 429 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.06□□□□□ -1.76
SF3B3Q15393 AC078814.3-201ENST00000553036 491 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.06□□□□□ -1.76
SF3B3Q15393 OR4K8P-201ENST00000578842 1048 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 MIR4738-201ENST00000579134 87 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.06□□□□□ -1.76
SF3B3Q15393 MIR2682-201ENST00000580305 110 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AL121992.2-201ENST00000606262 256 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AL162274.2-201ENST00000614406 332 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 FRG1KP-201ENST00000623592 341 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC018692.3-201ENST00000623929 123 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 AC090617.10-201ENST00000624308 134 ntBASIC4.06□□□□□ -1.76
SF3B3Q15393 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.06□□□□□ -1.76
SF3B3Q15393 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B3Q15393 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SF3B3Q15393 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SF3B3Q15393 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.06□□□□□ -1.76
SF3B3Q15393 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SF3B3Q15393 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.05□□□□□ -1.76
SF3B3Q15393 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SF3B3Q15393 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms