Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
CDK3Q00526 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CDK3Q00526 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.03□□□□□ -1.93
CDK3Q00526 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDK3Q00526 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
CDK3Q00526 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 Y_RNA.22-201ENST00000362492 102 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNU6-512P-201ENST00000364438 103 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNU6-1035P-201ENST00000384477 107 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNA5SP252-201ENST00000391131 119 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RPL17P50-201ENST00000396131 546 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 NDUFB4P4-201ENST00000404822 243 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNU2-16P-201ENST00000410712 136 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.02□□□□□ -1.93
CDK3Q00526 RPL32P35-201ENST00000415214 394 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.02□□□□□ -1.93
CDK3Q00526 RPL35AP12-201ENST00000425362 338 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 ZNF863P-201ENST00000426746 417 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AL589823.1-201ENST00000429577 183 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RPL23AP30-201ENST00000432419 501 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.02□□□□□ -1.93
CDK3Q00526 GPR143P-201ENST00000434155 205 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 DDX3P2-201ENST00000446138 111 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 NANOGNBP1-201ENST00000448444 480 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.02□□□□□ -1.93
CDK3Q00526 C1DP4-201ENST00000455429 424 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 RNU6-953P-201ENST00000459154 107 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC011825.1-201ENST00000484967 388 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC138853.1-201ENST00000503549 823 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 HMGB1P14-201ENST00000557424 591 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 H3F3AP1-201ENST00000559984 334 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AMZ2P1-203ENST00000565833 850 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 AGGF1P4-201ENST00000568249 801 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK3Q00526 AC098848.2-201ENST00000588023 330 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AC136601.2-201ENST00000604356 474 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AL161798.1-201ENST00000604630 131 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.02□□□□□ -1.93
CDK3Q00526 AC135507.2-201ENST00000612443 309 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 AL365204.3-201ENST00000612448 685 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 HULC.1-201ENST00000612720 240 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.02□□□□□ -1.93
CDK3Q00526 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.02□□□□□ -1.93
CDK3Q00526 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDK3Q00526 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK3Q00526 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDK3Q00526 RNU6-181P-201ENST00000363225 107 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RNU6-270P-201ENST00000364131 105 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RNU5A-6P-201ENST00000384136 116 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 Y_RNA.582-201ENST00000391023 95 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RNU6-817P-201ENST00000391083 104 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 UBA52P6-201ENST00000399822 382 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RNU2-66P-201ENST00000410650 161 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AC245291.1-201ENST00000419501 328 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK3Q00526 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.01□□□□□ -1.93
CDK3Q00526 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.01□□□□□ -1.93
CDK3Q00526 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 AC010099.1-201ENST00000455434 375 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RPS3AP17-201ENST00000472594 777 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK3Q00526 AC117522.1-201ENST00000509821 380 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 RNU6-445P-201ENST00000516949 107 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 RNU6-410P-201ENST00000517006 107 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK3Q00526 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.01□□□□□ -1.93
CDK3Q00526 AC022080.3-201ENST00000544433 482 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AL845331.3-202ENST00000562856 261 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 Z84480.1-201ENST00000605131 311 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 NDUFA8P1-201ENST00000605525 367 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AL121992.2-201ENST00000606262 256 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 AC073308.1-201ENST00000623696 305 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 MTND5P42-201ENST00000637720 498 ntBASIC3.01□□□□□ -1.93
CDK3Q00526 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK3Q00526 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK3Q00526 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3□□□□□ -1.93
CDK3Q00526 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CDK3Q00526 AC073325.2-201ENST00000339545 159 ntBASIC3□□□□□ -1.93
CDK3Q00526 SNORD56.3-201ENST00000363507 71 ntBASIC3□□□□□ -1.93
CDK3Q00526 RNU6-217P-201ENST00000384164 104 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms