Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC005000.2-201ENST00000605468 310 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC012467.1-201ENST00000607740 256 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.39□□□□□ -2.19
CCL20P78556 AC022202.1-201ENST00000613515 211 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC005296.1-201ENST00000616145 209 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC009268.2-201ENST00000621925 457 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AL118508.4-201ENST00000624142 1176 ntBASIC1.39□□□□□ -2.19
CCL20P78556 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.39□□□□□ -2.19
CCL20P78556 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCL20P78556 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCL20P78556 GNG5P1-201ENST00000255500 204 ntBASIC1.38□□□□□ -2.19
CCL20P78556 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCL20P78556 U3.12-201ENST00000364498 214 ntBASIC1.38□□□□□ -2.19
CCL20P78556 SNORA64-201ENST00000384674 134 ntBASIC1.38□□□□□ -2.19
CCL20P78556 RNU6-19P-201ENST00000384718 107 ntBASIC1.38□□□□□ -2.19
CCL20P78556 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CCL20P78556 HMGN2P39-201ENST00000398005 273 ntBASIC1.38□□□□□ -2.19
CCL20P78556 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.38□□□□□ -2.19
CCL20P78556 RN7SKP32-201ENST00000410167 303 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.38□□□□□ -2.19
CCL20P78556 AC009238.1-201ENST00000442165 424 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AC009237.6-201ENST00000446969 424 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCL20P78556 BX322784.1-201ENST00000455793 1077 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.38□□□□□ -2.19
CCL20P78556 AC126389.1-201ENST00000477436 290 ntBASIC1.38□□□□□ -2.19
CCL20P78556 CKS1BP2-201ENST00000497342 240 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL20P78556 RNA5SP165-201ENST00000517142 115 ntBASIC1.38□□□□□ -2.19
CCL20P78556 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.38□□□□□ -2.19
CCL20P78556 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCL20P78556 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL20P78556 ROCK1P1-201ENST00000573767 549 ntBASIC1.38□□□□□ -2.19
CCL20P78556 MIR4429-201ENST00000580105 73 ntBASIC1.38□□□□□ -2.19
CCL20P78556 MIR3944-201ENST00000581277 108 ntBASIC1.38□□□□□ -2.19
CCL20P78556 BBIP1P1-201ENST00000602999 279 ntBASIC1.38□□□□□ -2.19
CCL20P78556 MTCYBP22-201ENST00000603788 447 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AC005034.5-201ENST00000604219 466 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AL445435.1-201ENST00000604232 665 ntBASIC1.38□□□□□ -2.19
CCL20P78556 AL357080.1-201ENST00000617394 239 ntBASIC1.38□□□□□ -2.19
CCL20P78556 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCL20P78556 CDR1-202ENST00000625883 1485 ntBASIC1.37□□□□□ -2.19
CCL20P78556 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCL20P78556 RNU6-207P-201ENST00000384137 107 ntBASIC1.37□□□□□ -2.19
CCL20P78556 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.37□□□□□ -2.19
CCL20P78556 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.37□□□□□ -2.19
CCL20P78556 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 AC007435.1-201ENST00000421086 415 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 PTGES3P4-201ENST00000426243 356 ntBASIC1.37□□□□□ -2.19
CCL20P78556 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.37□□□□□ -2.19
CCL20P78556 NANOGP2-201ENST00000435391 727 ntBASIC1.37□□□□□ -2.19
CCL20P78556 DNAJC19P4-201ENST00000440115 345 ntBASIC1.37□□□□□ -2.19
CCL20P78556 MTND2P20-201ENST00000440805 661 ntBASIC1.37□□□□□ -2.19
CCL20P78556 RPS3AP12-201ENST00000443616 753 ntBASIC1.37□□□□□ -2.19
CCL20P78556 RPL7P12-201ENST00000446719 750 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC079776.3-201ENST00000450665 370 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 AC013267.1-201ENST00000458227 267 ntBASIC1.37□□□□□ -2.19
CCL20P78556 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCL20P78556 RPL7P18-201ENST00000478965 734 ntBASIC1.37□□□□□ -2.19
CCL20P78556 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCL20P78556 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.37□□□□□ -2.19
CCL20P78556 AC008837.1-201ENST00000511513 412 ntBASIC1.37□□□□□ -2.19
CCL20P78556 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.37□□□□□ -2.19
CCL20P78556 SNORA25.11-201ENST00000515935 105 ntBASIC1.37□□□□□ -2.19
CCL20P78556 RNA5SP137-201ENST00000516833 135 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 AC107953.1-201ENST00000522216 297 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.37□□□□□ -2.19
CCL20P78556 AP003497.1-201ENST00000528472 562 ntBASIC1.37□□□□□ -2.19
CCL20P78556 SLC2A13P1-201ENST00000531560 322 ntBASIC1.37□□□□□ -2.19
CCL20P78556 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.37□□□□□ -2.19
CCL20P78556 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCL20P78556 HIGD1AP17-201ENST00000554576 276 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 AC104581.2-201ENST00000572227 430 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL20P78556 NRBF2P1-201ENST00000587407 859 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AF038458.1-201ENST00000588406 262 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AL031274.2-201ENST00000599419 203 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC243960.4-201ENST00000600532 288 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC069304.2-201ENST00000605154 435 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC007038.2-201ENST00000608095 740 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AP005229.2-201ENST00000609980 697 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC068944.2-201ENST00000610373 403 ntBASIC1.37□□□□□ -2.19
CCL20P78556 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC020658.4-201ENST00000613987 684 ntBASIC1.37□□□□□ -2.19
CCL20P78556 TUG1_2.1-201ENST00000614234 87 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AL445264.1-201ENST00000621719 171 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC079416.3-201ENST00000624479 549 ntBASIC1.37□□□□□ -2.19
CCL20P78556 MIR219B-201ENST00000637023 88 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AP006437.1-201ENST00000641440 3685 ntBASIC1.37□□□□□ -2.19
CCL20P78556 AC008555.8-201ENST00000623602 2168 ntBASIC1.37□□□□□ -2.19
CCL20P78556 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCL20P78556 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.36□□□□□ -2.19
CCL20P78556 MTND5P29-201ENST00000458676 1807 ntBASIC1.36□□□□□ -2.19
CCL20P78556 U3.13-201ENST00000364804 214 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms