Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL390862.1-201ENST00000635467 1469 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC103710.2-202ENST00000641454 2853 ntBASIC1.53□□□□□ -2.17
HIST1H3AP68431 RNU1-39P-201ENST00000383897 165 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 RNU6-481P-201ENST00000384194 107 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 MIR217-201ENST00000384817 110 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 HMGN2P39-201ENST00000398005 273 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 USP9YP19-201ENST00000412165 485 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 NDUFS5P4-201ENST00000412983 318 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 RPL23AP39-201ENST00000415533 405 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 USP9YP13-201ENST00000417797 480 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AL645568.3-201ENST00000433683 316 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AL691517.1-201ENST00000440833 1235 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC009238.1-201ENST00000442165 424 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC009237.6-201ENST00000446969 424 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H3AP68431 RNA5SP112-201ENST00000515937 99 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 NRON-201ENST00000517270 370 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC104581.2-201ENST00000572227 430 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC005261.5-201ENST00000596280 355 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC024257.5-201ENST00000612739 531 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 AC084824.4-201ENST00000620106 731 ntBASIC1.52□□□□□ -2.17
HIST1H3AP68431 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H3AP68431 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H3AP68431 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
HIST1H3AP68431 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H3AP68431 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H3AP68431 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 SNORA40.18-201ENST00000391200 128 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 IFNA20P-201ENST00000436840 528 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 COX6CP18-201ENST00000448769 222 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 ATG12P2-201ENST00000456830 416 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 snoU109.1-201ENST00000459339 135 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 RPL21P99-201ENST00000480369 423 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 CKS1BP2-201ENST00000497342 240 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AC020699.1-201ENST00000505161 445 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 MIR3945-201ENST00000581853 98 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AP001269.3-201ENST00000588718 329 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 AL031274.2-201ENST00000599419 203 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AC013412.1-201ENST00000610687 192 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AC020658.4-201ENST00000613987 684 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 AL596245.1-201ENST00000618994 362 ntBASIC1.51□□□□□ -2.17
HIST1H3AP68431 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.51□□□□□ -2.17
HIST1H3AP68431 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HIST1H3AP68431 RNA5SP450-201ENST00000411206 102 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AL161449.1-201ENST00000414531 1199 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AL357078.2-201ENST00000416486 427 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 RPS24P7-201ENST00000416921 246 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 MTCYBP38-201ENST00000417160 1123 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AL358453.1-201ENST00000422522 250 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AL353729.1-201ENST00000425044 720 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 HSPE1P21-201ENST00000438283 308 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 GXYLT1P1-201ENST00000446657 490 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 RPS15AP17-201ENST00000470598 390 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 RPL7P18-201ENST00000478965 734 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC055855.1-201ENST00000489563 579 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HIST1H3AP68431 MRPS33P3-201ENST00000513456 322 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 RNA5SP137-201ENST00000516833 135 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 NACAP3-201ENST00000552100 481 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 LINC00933-203ENST00000559812 219 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 MIR3167-201ENST00000579623 85 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AL035411.2-201ENST00000604022 421 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC106052.1-201ENST00000608029 497 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC093673.2-201ENST00000609674 331 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 AC116618.1-201ENST00000634617 774 ntBASIC1.5□□□□□ -2.17
HIST1H3AP68431 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.5□□□□□ -2.17
HIST1H3AP68431 ADAM3A-203ENST00000461344 2157 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 VN1R51P-201ENST00000411675 945 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms