Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERVK_113P62684 MIR369-201ENST00000362155 70 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 Y_RNA.167-201ENST00000363735 109 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 MTND2P23-201ENST00000422990 651 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.36□□□□□ -1.71
HERVK_113P62684 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.36□□□□□ -1.71
HERVK_113P62684 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.36□□□□□ -1.71
HERVK_113P62684 NEFMP1-201ENST00000443423 1006 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 CYCSP35-201ENST00000451978 304 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 RPL21P93-201ENST00000480465 489 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AC096576.1-201ENST00000489014 359 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.36□□□□□ -1.71
HERVK_113P62684 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.36□□□□□ -1.71
HERVK_113P62684 KLHL2P1-201ENST00000508691 521 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 TBCAP3-201ENST00000512475 312 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 RNU6-189P-201ENST00000516120 101 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 RNU6-685P-201ENST00000517088 95 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 RNU6-840P-201ENST00000517275 65 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.36□□□□□ -1.71
HERVK_113P62684 AC020661.2-201ENST00000560114 134 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AL360085.1-201ENST00000604713 532 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AL160281.1-201ENST00000605307 311 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AL591424.2-201ENST00000617023 128 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 AC007998.5-201ENST00000622938 237 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.36□□□□□ -1.71
HERVK_113P62684 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HERVK_113P62684 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERVK_113P62684 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERVK_113P62684 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERVK_113P62684 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERVK_113P62684 RNU6-82P-201ENST00000363970 107 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 EIF4E2P1-201ENST00000393781 255 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC074085.1-201ENST00000413598 418 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.35□□□□□ -1.71
HERVK_113P62684 RPL21P112-201ENST00000434403 463 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 RPS3AP52-201ENST00000435639 297 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC090774.1-201ENST00000435925 246 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 RPL21P23-201ENST00000446654 460 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 RPS15AP27-201ENST00000449183 343 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC012181.1-201ENST00000479895 423 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC027575.1-201ENST00000481064 460 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.35□□□□□ -1.71
HERVK_113P62684 RNU6-327P-201ENST00000516270 127 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 RNU6-566P-201ENST00000516790 107 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 Y_RNA.718-201ENST00000517110 102 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.35□□□□□ -1.71
HERVK_113P62684 AC008489.1-201ENST00000524271 483 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.35□□□□□ -1.71
HERVK_113P62684 OR11H5P-201ENST00000554039 926 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AL121576.1-201ENST00000556055 276 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.35□□□□□ -1.71
HERVK_113P62684 ATP1B3P1-201ENST00000605365 821 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC080078.3-201ENST00000605407 463 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 AC134503.1-201ENST00000633048 54 ntBASIC4.35□□□□□ -1.71
HERVK_113P62684 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERVK_113P62684 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
HERVK_113P62684 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HERVK_113P62684 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
HERVK_113P62684 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.34□□□□□ -1.71
HERVK_113P62684 AC103710.2-202ENST00000641454 2853 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HERVK_113P62684 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERVK_113P62684 RNU6-190P-201ENST00000384154 102 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 RNU6-1127P-201ENST00000384580 107 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERVK_113P62684 MIR548P-201ENST00000408336 84 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 RPL37P10-201ENST00000412884 288 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 VN1R36P-201ENST00000414936 291 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AL139396.1-201ENST00000421137 167 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.34□□□□□ -1.71
HERVK_113P62684 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.34□□□□□ -1.71
HERVK_113P62684 ATP5HP2-201ENST00000433885 485 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 GTF2IP13-201ENST00000438487 386 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.34□□□□□ -1.71
HERVK_113P62684 SNORD108-201ENST00000459332 71 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 TRBV1-201ENST00000476502 284 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 RPL7P43-201ENST00000478876 753 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.34□□□□□ -1.71
HERVK_113P62684 HIGD1AP13-201ENST00000509878 289 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.34□□□□□ -1.71
HERVK_113P62684 RN7SKP24-201ENST00000515888 284 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 Y_RNA.689-201ENST00000516589 107 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 RNU6-256P-201ENST00000516747 97 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 OR4H12P-201ENST00000556269 907 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 MIR5195-201ENST00000583555 115 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.34□□□□□ -1.71
HERVK_113P62684 AC007619.2-201ENST00000605743 379 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 SNORA62.6-201ENST00000606322 83 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AC006065.5-201ENST00000623427 349 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 AC032011.1-201ENST00000611703 1549 ntBASIC4.34□□□□□ -1.71
HERVK_113P62684 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.34□□□□□ -1.72
HERVK_113P62684 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms