Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CHMP4BP1P59074 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RLIMP1-201ENST00000339626 1680 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNU6-562P-201ENST00000362731 107 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNU1-14P-201ENST00000362759 152 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNA5SP167-201ENST00000365461 116 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNU6-1040P-201ENST00000383974 107 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 Y_RNA.496-201ENST00000384444 101 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 MIR554-201ENST00000384874 96 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RPL23AP31-201ENST00000456160 467 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNU7-167P-201ENST00000459160 62 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 HSPE1P6-201ENST00000479457 291 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC108860.1-201ENST00000484521 383 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC026782.1-201ENST00000512952 449 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 GMPSP1-201ENST00000514075 579 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 SNORA31.8-201ENST00000516327 108 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 RNU6-1332P-201ENST00000516666 104 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC005014.2-201ENST00000607795 599 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 SDR42E1P2-201ENST00000614861 481 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 MIR6128-201ENST00000615528 109 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AC092608.2-201ENST00000624427 218 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 AL078596.1-201ENST00000624856 447 ntBASIC4.8□□□□□ -1.64
CHMP4BP1P59074 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHMP4BP1P59074 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 DEFB108F-201ENST00000344638 222 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RNU6-1303P-201ENST00000364841 107 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 Y_RNA.463-201ENST00000384271 102 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RNU6-505P-201ENST00000384427 107 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RNU6-393P-201ENST00000384475 107 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 MIR607-201ENST00000385241 96 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RPS4XP7-201ENST00000406274 780 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC108032.1-201ENST00000416706 207 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 ATG3P1-201ENST00000419507 911 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RPL21P66-201ENST00000426566 466 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 TXNP1-201ENST00000441872 371 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RN7SL691P-201ENST00000494487 301 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RPS27AP13-201ENST00000498403 237 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC097473.1-201ENST00000508142 408 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC023141.12-201ENST00000512399 199 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RNU6-840P-201ENST00000517275 65 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AP003122.3-201ENST00000526316 255 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 MED28P6-201ENST00000558776 231 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC005951.2-201ENST00000576282 495 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AL138889.2-201ENST00000603883 242 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AC112200.1-201ENST00000625015 234 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 MAPK10-253ENST00000641010 4072 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AL137003.2-201ENST00000606924 2538 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 AL592182.3-201ENST00000642132 3304 ntBASIC4.79□□□□□ -1.64
CHMP4BP1P59074 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4BP1P59074 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4BP1P59074 AC125257.1-201ENST00000560400 2930 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CHMP4BP1P59074 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CHMP4BP1P59074 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4BP1P59074 SNORA31-201ENST00000362607 130 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 RNA5SP189-201ENST00000364920 115 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 RNU6-95P-201ENST00000384697 107 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 MIR670-201ENST00000390142 98 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 AL356095.1-201ENST00000417217 199 ntBASIC4.78□□□□□ -1.64
CHMP4BP1P59074 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms