Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.6□□□□□ -1.83
SUMO3P55854 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.6□□□□□ -1.83
SUMO3P55854 HSPE1P7-201ENST00000604681 321 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AL592436.1-201ENST00000605135 558 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC008962.1-201ENST00000605729 304 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC063943.3-201ENST00000615562 356 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AL138880.2-201ENST00000616214 239 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AL136164.4-201ENST00000625013 2135 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SUMO3P55854 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SUMO3P55854 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SUMO3P55854 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.6□□□□□ -1.83
SUMO3P55854 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SUMO3P55854 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SUMO3P55854 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SUMO3P55854 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SUMO3P55854 UBE3AP2-201ENST00000429033 2259 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SUMO3P55854 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SUMO3P55854 Y_RNA.166-201ENST00000363730 102 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 SNORA75B-201ENST00000384053 137 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.59□□□□□ -1.83
SUMO3P55854 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.59□□□□□ -1.83
SUMO3P55854 AC087650.1-201ENST00000431445 468 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 NDUFA5P4-201ENST00000436704 385 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
SUMO3P55854 RANP8-201ENST00000444720 713 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 NDUFB1P2-201ENST00000449477 176 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 RPL30P14-201ENST00000482744 348 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 SNORA14.1-201ENST00000516113 141 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 RNA5SP179-201ENST00000517284 121 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.59□□□□□ -1.83
SUMO3P55854 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SUMO3P55854 AC243972.3-201ENST00000539655 198 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
SUMO3P55854 LRRC37A5P-203ENST00000580181 585 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 AC007938.3-201ENST00000604965 623 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 AC091167.4-201ENST00000605079 184 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.59□□□□□ -1.83
SUMO3P55854 AC068831.7-201ENST00000616954 363 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 ZYXP1-201ENST00000617638 118 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.59□□□□□ -1.83
SUMO3P55854 AL031601.2-202ENST00000622650 282 ntBASIC3.59□□□□□ -1.83
SUMO3P55854 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.59□□□□□ -1.83
SUMO3P55854 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SUMO3P55854 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SUMO3P55854 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SUMO3P55854 AP001148.1-201ENST00000624124 2359 ntBASIC3.59□□□□□ -1.84
SUMO3P55854 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SUMO3P55854 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SUMO3P55854 Y_RNA.70-201ENST00000362886 110 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 SNORD113-7-201ENST00000363762 77 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RNU6-270P-201ENST00000364131 105 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RNA5SP97-201ENST00000365006 84 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 MIR199A2-201ENST00000385289 110 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SUMO3P55854 RNU6-1009P-201ENST00000390996 107 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 MIR888-201ENST00000401186 77 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RN7SKP32-201ENST00000410167 303 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
SUMO3P55854 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 AL671855.1-201ENST00000446875 1203 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 AP002812.1-201ENST00000495378 474 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 TRBVA-201ENST00000498804 316 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RNU6-507P-201ENST00000516045 100 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RNU6-928P-201ENST00000516876 104 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 RNU6-703P-201ENST00000516946 107 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 MIR4697-201ENST00000582977 78 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 AL355598.1-201ENST00000604169 202 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 ATP1B3P1-201ENST00000605365 821 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 LARP7P1-201ENST00000605576 316 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 MIR6500-201ENST00000622700 86 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 U2.21-201ENST00000637295 81 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SUMO3P55854 OTUD4P1-201ENST00000237841 3067 ntBASIC3.58□□□□□ -1.84
SUMO3P55854 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SUMO3P55854 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SUMO3P55854 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.58□□□□□ -1.84
SUMO3P55854 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SUMO3P55854 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SUMO3P55854 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
SUMO3P55854 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SUMO3P55854 RN7SKP227-201ENST00000364445 330 ntBASIC3.57□□□□□ -1.84
SUMO3P55854 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms