Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXG1P55316 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 AL451050.1-201ENST00000450126 415 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC004801.2-202ENST00000463559 283 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC010655.3-201ENST00000478818 450 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 Y_RNA.654-201ENST00000497848 106 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXG1P55316 NDUFB4P9-201ENST00000511646 388 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 RNU6-976P-201ENST00000516086 111 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.35□□□□□ -1.87
FOXG1P55316 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXG1P55316 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXG1P55316 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXG1P55316 MIR1254-2-201ENST00000579553 63 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.35□□□□□ -1.87
FOXG1P55316 RPL23AP92-201ENST00000603609 255 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 AL162373.1-201ENST00000620433 407 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 MTND5P30-201ENST00000452896 1731 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
FOXG1P55316 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXG1P55316 API5P2-201ENST00000397055 1498 ntBASIC3.35□□□□□ -1.87
FOXG1P55316 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
FOXG1P55316 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
FOXG1P55316 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 IPO8P1-201ENST00000455509 3109 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 LINC02471-203ENST00000641941 4752 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 RNU6-1115P-201ENST00000362490 106 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RNU6-238P-201ENST00000363313 106 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RNU6-511P-201ENST00000363496 107 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 Y_RNA.176-201ENST00000363815 109 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RNU6-1040P-201ENST00000383974 107 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RNU6-601P-201ENST00000384540 107 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 MIR124-3-201ENST00000384866 87 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
FOXG1P55316 MIR1250-201ENST00000408098 113 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXG1P55316 AL139396.1-201ENST00000421137 167 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AC096644.2-201ENST00000429278 159 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 PSMA2P3-201ENST00000429685 675 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL353748.1-201ENST00000440753 474 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 PPIAP3-201ENST00000450588 505 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 U8.20-201ENST00000459445 131 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AC084198.1-201ENST00000477747 402 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXG1P55316 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 Y_RNA.661-201ENST00000516003 99 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RNU7-51P-201ENST00000516560 62 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AP002404.1-201ENST00000532005 451 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXG1P55316 MYL12BP1-201ENST00000569826 507 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AC138761.3-201ENST00000579993 334 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXG1P55316 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 AC092747.3-201ENST00000603769 301 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXG1P55316 AL596245.1-201ENST00000618994 362 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AC039056.2-201ENST00000622261 511 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL136313.1-201ENST00000624804 202 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXG1P55316 U6.114-201ENST00000636407 96 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL669831.3-213ENST00000636676 183 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXG1P55316 AP001486.2-201ENST00000561652 5113 ntBASIC3.34□□□□□ -1.87
FOXG1P55316 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXG1P55316 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXG1P55316 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXG1P55316 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXG1P55316 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
FOXG1P55316 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
FOXG1P55316 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 SNORD6-201ENST00000365444 73 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms