Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC103988.1-201ENST00000566382 2177 ntBASIC3.76□□□□□ -1.81
COPAP53621 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 AC008568.2-201ENST00000623862 2313 ntBASIC3.76□□□□□ -1.81
COPAP53621 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 MIR493-201ENST00000385254 89 ntBASIC3.76□□□□□ -1.81
COPAP53621 AL391417.1-201ENST00000404100 426 ntBASIC3.76□□□□□ -1.81
COPAP53621 NDUFB4P7-201ENST00000423198 363 ntBASIC3.76□□□□□ -1.81
COPAP53621 MTND4P25-201ENST00000441039 533 ntBASIC3.76□□□□□ -1.81
COPAP53621 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.76□□□□□ -1.81
COPAP53621 MTND1P18-201ENST00000448191 573 ntBASIC3.76□□□□□ -1.81
COPAP53621 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 RNU6-953P-201ENST00000459154 107 ntBASIC3.76□□□□□ -1.81
COPAP53621 GMFBP1-201ENST00000467831 427 ntBASIC3.76□□□□□ -1.81
COPAP53621 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 PCBP2P3-201ENST00000509726 843 ntBASIC3.76□□□□□ -1.81
COPAP53621 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 RNA5SP401-201ENST00000515920 127 ntBASIC3.76□□□□□ -1.81
COPAP53621 RNA5SP208-201ENST00000516156 78 ntBASIC3.76□□□□□ -1.81
COPAP53621 RNU6-677P-201ENST00000516914 101 ntBASIC3.76□□□□□ -1.81
COPAP53621 RNA5SP503-201ENST00000517047 117 ntBASIC3.76□□□□□ -1.81
COPAP53621 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.76□□□□□ -1.81
COPAP53621 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.76□□□□□ -1.81
COPAP53621 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.76□□□□□ -1.81
COPAP53621 HIF1AP1-201ENST00000553642 175 ntBASIC3.76□□□□□ -1.81
COPAP53621 AL121579.1-201ENST00000555129 305 ntBASIC3.76□□□□□ -1.81
COPAP53621 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.76□□□□□ -1.81
COPAP53621 MIR4775-201ENST00000581168 75 ntBASIC3.76□□□□□ -1.81
COPAP53621 AC060780.3-201ENST00000589464 80 ntBASIC3.76□□□□□ -1.81
COPAP53621 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.76□□□□□ -1.81
COPAP53621 AL365204.3-201ENST00000612448 685 ntBASIC3.76□□□□□ -1.81
COPAP53621 DUXAP9-208ENST00000622815 614 ntBASIC3.76□□□□□ -1.81
COPAP53621 AC024940.5-201ENST00000622889 474 ntBASIC3.76□□□□□ -1.81
COPAP53621 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.76□□□□□ -1.81
COPAP53621 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
COPAP53621 AC090740.1-201ENST00000623193 2262 ntBASIC3.75□□□□□ -1.81
COPAP53621 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.75□□□□□ -1.81
COPAP53621 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
COPAP53621 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 API5P2-201ENST00000397055 1498 ntBASIC3.75□□□□□ -1.81
COPAP53621 NACAP2-201ENST00000318548 624 ntBASIC3.75□□□□□ -1.81
COPAP53621 RNU6-288P-201ENST00000363690 104 ntBASIC3.75□□□□□ -1.81
COPAP53621 RNU6-61P-201ENST00000365528 109 ntBASIC3.75□□□□□ -1.81
COPAP53621 RNU6-190P-201ENST00000384154 102 ntBASIC3.75□□□□□ -1.81
COPAP53621 SNORD37.1-201ENST00000390968 65 ntBASIC3.75□□□□□ -1.81
COPAP53621 RNU1-101P-201ENST00000391171 127 ntBASIC3.75□□□□□ -1.81
COPAP53621 BTF3L4P3-201ENST00000418879 476 ntBASIC3.75□□□□□ -1.81
COPAP53621 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.75□□□□□ -1.81
COPAP53621 AP000907.1-201ENST00000428428 510 ntBASIC3.75□□□□□ -1.81
COPAP53621 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.75□□□□□ -1.81
COPAP53621 CACYBPP2-201ENST00000453625 678 ntBASIC3.75□□□□□ -1.81
COPAP53621 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.75□□□□□ -1.81
COPAP53621 RPL37P6-201ENST00000460682 294 ntBASIC3.75□□□□□ -1.81
COPAP53621 RPS29P25-201ENST00000481709 171 ntBASIC3.75□□□□□ -1.81
COPAP53621 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.75□□□□□ -1.81
COPAP53621 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.75□□□□□ -1.81
COPAP53621 AC025465.4-201ENST00000513422 638 ntBASIC3.75□□□□□ -1.81
COPAP53621 RNU6-927P-201ENST00000516199 100 ntBASIC3.75□□□□□ -1.81
COPAP53621 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.75□□□□□ -1.81
COPAP53621 AC022690.1-201ENST00000526681 550 ntBASIC3.75□□□□□ -1.81
COPAP53621 OR5B10P-201ENST00000532869 642 ntBASIC3.75□□□□□ -1.81
COPAP53621 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.75□□□□□ -1.81
COPAP53621 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.75□□□□□ -1.81
COPAP53621 AP005205.1-201ENST00000563503 508 ntBASIC3.75□□□□□ -1.81
COPAP53621 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.75□□□□□ -1.81
COPAP53621 AL161756.2-201ENST00000604597 246 ntBASIC3.75□□□□□ -1.81
COPAP53621 AL137849.1-201ENST00000604767 169 ntBASIC3.75□□□□□ -1.81
COPAP53621 AL158032.1-201ENST00000605401 106 ntBASIC3.75□□□□□ -1.81
COPAP53621 AC008962.1-201ENST00000605729 304 ntBASIC3.75□□□□□ -1.81
COPAP53621 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.75□□□□□ -1.81
COPAP53621 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COPAP53621 MFSD8-236ENST00000641509 4050 ntBASIC3.75□□□□□ -1.81
COPAP53621 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPAP53621 RNU6-451P-201ENST00000362921 107 ntBASIC3.74□□□□□ -1.81
COPAP53621 RNU5E-4P-201ENST00000364931 120 ntBASIC3.74□□□□□ -1.81
COPAP53621 Y_RNA.303-201ENST00000364998 94 ntBASIC3.74□□□□□ -1.81
COPAP53621 RNU6-1029P-201ENST00000384109 107 ntBASIC3.74□□□□□ -1.81
COPAP53621 MIR34B-201ENST00000385076 84 ntBASIC3.74□□□□□ -1.81
COPAP53621 AL354719.1-201ENST00000406535 843 ntBASIC3.74□□□□□ -1.81
COPAP53621 RNA5SP118-201ENST00000410385 109 ntBASIC3.74□□□□□ -1.81
COPAP53621 RNU6-1068P-201ENST00000410958 103 ntBASIC3.74□□□□□ -1.81
COPAP53621 OR9R1P-201ENST00000412200 877 ntBASIC3.74□□□□□ -1.81
COPAP53621 AC091390.3-201ENST00000426478 338 ntBASIC3.74□□□□□ -1.81
COPAP53621 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.74□□□□□ -1.81
COPAP53621 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
COPAP53621 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms