Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 RPL21P8-201ENST00000465083 535 ntBASIC3.72□□□□□ -1.81
NEK3P51956 AC128713.1-201ENST00000471495 306 ntBASIC3.72□□□□□ -1.81
NEK3P51956 RPL9P33-201ENST00000484311 566 ntBASIC3.72□□□□□ -1.81
NEK3P51956 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.72□□□□□ -1.81
NEK3P51956 RBBP4P6-201ENST00000508098 202 ntBASIC3.72□□□□□ -1.81
NEK3P51956 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.72□□□□□ -1.81
NEK3P51956 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 NDUFB9P3-201ENST00000521269 501 ntBASIC3.72□□□□□ -1.81
NEK3P51956 IGHV3-76-201ENST00000522465 295 ntBASIC3.72□□□□□ -1.81
NEK3P51956 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
NEK3P51956 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
NEK3P51956 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 AC068790.6-201ENST00000602558 258 ntBASIC3.72□□□□□ -1.81
NEK3P51956 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NEK3P51956 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.72□□□□□ -1.81
NEK3P51956 AC024940.5-201ENST00000622889 474 ntBASIC3.72□□□□□ -1.81
NEK3P51956 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
NEK3P51956 AC004972.1-201ENST00000623934 2209 ntBASIC3.72□□□□□ -1.81
NEK3P51956 MTND4P35-201ENST00000604257 1375 ntBASIC3.72□□□□□ -1.81
NEK3P51956 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEK3P51956 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEK3P51956 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.72□□□□□ -1.81
NEK3P51956 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NEK3P51956 NACAP2-201ENST00000318548 624 ntBASIC3.71□□□□□ -1.82
NEK3P51956 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NEK3P51956 Y_RNA.6-201ENST00000362350 114 ntBASIC3.71□□□□□ -1.82
NEK3P51956 RNU1-105P-201ENST00000363470 161 ntBASIC3.71□□□□□ -1.82
NEK3P51956 RNU6-192P-201ENST00000391253 100 ntBASIC3.71□□□□□ -1.82
NEK3P51956 RN7SKP285-201ENST00000410137 318 ntBASIC3.71□□□□□ -1.82
NEK3P51956 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
NEK3P51956 USP9YP6-201ENST00000413550 854 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 RPS29P4-201ENST00000414733 161 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC063979.1-201ENST00000415539 377 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 HSPE1P1-201ENST00000421494 318 ntBASIC3.71□□□□□ -1.82
NEK3P51956 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.71□□□□□ -1.82
NEK3P51956 RPL7P46-201ENST00000425129 740 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC098614.2-201ENST00000426040 255 ntBASIC3.71□□□□□ -1.82
NEK3P51956 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.71□□□□□ -1.82
NEK3P51956 AL365496.1-201ENST00000426885 215 ntBASIC3.71□□□□□ -1.82
NEK3P51956 OR2B8P-201ENST00000432841 938 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 RPS29P15-201ENST00000458329 171 ntBASIC3.71□□□□□ -1.82
NEK3P51956 RNU6-261P-201ENST00000459506 102 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC006512.1-201ENST00000468816 291 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC104472.2-201ENST00000469035 601 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
NEK3P51956 AC083798.1-201ENST00000472671 131 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 FCF1P3-201ENST00000496394 590 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 RNU1-103P-201ENST00000516502 125 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 MTCO3P24-201ENST00000572729 782 ntBASIC3.71□□□□□ -1.82
NEK3P51956 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
NEK3P51956 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.71□□□□□ -1.82
NEK3P51956 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.71□□□□□ -1.82
NEK3P51956 AC080078.2-201ENST00000603766 501 ntBASIC3.71□□□□□ -1.82
NEK3P51956 NUTF2P8-201ENST00000604593 363 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AL670379.4-201ENST00000605279 254 ntBASIC3.71□□□□□ -1.82
NEK3P51956 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
NEK3P51956 CR381653.2-201ENST00000624041 768 ntBASIC3.71□□□□□ -1.82
NEK3P51956 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NEK3P51956 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.82
NEK3P51956 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NEK3P51956 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEK3P51956 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NEK3P51956 RNU6-550P-201ENST00000391057 101 ntBASIC3.7□□□□□ -1.82
NEK3P51956 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 HMGB3P20-201ENST00000417997 600 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC245291.1-201ENST00000419501 328 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 AL353193.1-201ENST00000421444 268 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
NEK3P51956 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.7□□□□□ -1.82
NEK3P51956 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
NEK3P51956 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
NEK3P51956 RPL21P13-201ENST00000488305 481 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC019235.1-201ENST00000503847 207 ntBASIC3.7□□□□□ -1.82
NEK3P51956 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.7□□□□□ -1.82
NEK3P51956 SNORA40.12-201ENST00000516329 111 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC104383.1-201ENST00000530297 370 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.7□□□□□ -1.82
NEK3P51956 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEK3P51956 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
NEK3P51956 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.7□□□□□ -1.82
NEK3P51956 MIR5692A1-201ENST00000580523 69 ntBASIC3.7□□□□□ -1.82
NEK3P51956 MIR548AC-201ENST00000585049 88 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms