Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
SDC4P31431 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.38□□□□□ -2.19
SDC4P31431 AC104763.3-201ENST00000613765 618 ntBASIC1.38□□□□□ -2.19
SDC4P31431 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
SDC4P31431 FRG1HP-204ENST00000617940 757 ntBASIC1.38□□□□□ -2.19
SDC4P31431 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SDC4P31431 RNU5A-1-201ENST00000362698 116 ntBASIC1.37□□□□□ -2.19
SDC4P31431 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SDC4P31431 HMGB1P17-201ENST00000403495 628 ntBASIC1.37□□□□□ -2.19
SDC4P31431 U6atac.2-201ENST00000408644 118 ntBASIC1.37□□□□□ -2.19
SDC4P31431 RNA5SP450-201ENST00000411206 102 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.37□□□□□ -2.19
SDC4P31431 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.37□□□□□ -2.19
SDC4P31431 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.37□□□□□ -2.19
SDC4P31431 AC104058.1-201ENST00000448028 297 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
SDC4P31431 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
SDC4P31431 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.37□□□□□ -2.19
SDC4P31431 AC008834.1-201ENST00000511612 175 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.37□□□□□ -2.19
SDC4P31431 CR383656.7-201ENST00000548164 174 ntBASIC1.37□□□□□ -2.19
SDC4P31431 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
SDC4P31431 SNORD39.3-201ENST00000584451 71 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.37□□□□□ -2.19
SDC4P31431 AL078605.1-201ENST00000603529 500 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AC021755.4-201ENST00000616620 456 ntBASIC1.37□□□□□ -2.19
SDC4P31431 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.37□□□□□ -2.19
SDC4P31431 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SDC4P31431 AL356473.1-201ENST00000406203 1408 ntBASIC1.37□□□□□ -2.19
SDC4P31431 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SDC4P31431 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.37□□□□□ -2.19
SDC4P31431 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
SDC4P31431 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SDC4P31431 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.36□□□□□ -2.19
SDC4P31431 U3.13-201ENST00000364804 214 ntBASIC1.36□□□□□ -2.19
SDC4P31431 HMGN2P39-201ENST00000398005 273 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AL590084.1-201ENST00000407885 387 ntBASIC1.36□□□□□ -2.19
SDC4P31431 RNU2-15P-201ENST00000410692 191 ntBASIC1.36□□□□□ -2.19
SDC4P31431 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.36□□□□□ -2.19
SDC4P31431 Z82210.1-201ENST00000440037 231 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.36□□□□□ -2.19
SDC4P31431 MTCO1P31-201ENST00000506355 492 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AF213884.2-201ENST00000510417 903 ntBASIC1.36□□□□□ -2.19
SDC4P31431 RNA5SP137-201ENST00000516833 135 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.36□□□□□ -2.19
SDC4P31431 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.36□□□□□ -2.19
SDC4P31431 RPS3AP4-201ENST00000555161 764 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AP001269.3-201ENST00000588718 329 ntBASIC1.36□□□□□ -2.19
SDC4P31431 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.36□□□□□ -2.19
SDC4P31431 AL031176.1-201ENST00000604554 466 ntBASIC1.36□□□□□ -2.19
SDC4P31431 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
SDC4P31431 LINC00216-201ENST00000623548 1126 ntBASIC1.36□□□□□ -2.19
SDC4P31431 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
SDC4P31431 MTND5P30-201ENST00000452896 1731 ntBASIC1.35□□□□□ -2.19
SDC4P31431 RNU1-72P-201ENST00000362976 153 ntBASIC1.35□□□□□ -2.19
SDC4P31431 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
SDC4P31431 MIR934-201ENST00000401241 83 ntBASIC1.35□□□□□ -2.19
SDC4P31431 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SDC4P31431 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.35□□□□□ -2.19
SDC4P31431 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.35□□□□□ -2.19
SDC4P31431 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.35□□□□□ -2.19
SDC4P31431 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.35□□□□□ -2.19
SDC4P31431 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.35□□□□□ -2.19
SDC4P31431 RPL12P25-201ENST00000455592 494 ntBASIC1.35□□□□□ -2.19
SDC4P31431 BX322784.1-201ENST00000455793 1077 ntBASIC1.35□□□□□ -2.19
SDC4P31431 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
SDC4P31431 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.35□□□□□ -2.19
SDC4P31431 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.35□□□□□ -2.19
SDC4P31431 ARL2BPP2-201ENST00000550907 489 ntBASIC1.35□□□□□ -2.19
SDC4P31431 AC105245.1-201ENST00000581934 244 ntBASIC1.35□□□□□ -2.19
SDC4P31431 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.35□□□□□ -2.19
SDC4P31431 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.35□□□□□ -2.19
SDC4P31431 AC006338.1-201ENST00000618453 749 ntBASIC1.35□□□□□ -2.19
SDC4P31431 AL590396.2-201ENST00000636511 1041 ntBASIC1.35□□□□□ -2.19
SDC4P31431 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SDC4P31431 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.34□□□□□ -2.19
SDC4P31431 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
SDC4P31431 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
SDC4P31431 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
SDC4P31431 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.34□□□□□ -2.19
SDC4P31431 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.34□□□□□ -2.19
SDC4P31431 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.34□□□□□ -2.19
SDC4P31431 MTND6P13-201ENST00000443510 523 ntBASIC1.34□□□□□ -2.19
SDC4P31431 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
SDC4P31431 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.34□□□□□ -2.19
SDC4P31431 HMGB1P36-201ENST00000487709 576 ntBASIC1.34□□□□□ -2.19
SDC4P31431 MTCYBP35-201ENST00000503630 1137 ntBASIC1.34□□□□□ -2.19
SDC4P31431 SNORA31.6-201ENST00000516241 130 ntBASIC1.34□□□□□ -2.19
SDC4P31431 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.34□□□□□ -2.19
SDC4P31431 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SDC4P31431 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
SDC4P31431 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
SDC4P31431 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SDC4P31431 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.34□□□□□ -2.19
SDC4P31431 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
SDC4P31431 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.34□□□□□ -2.19
SDC4P31431 MTCO1P18-201ENST00000455518 1419 ntBASIC1.33□□□□□ -2.2
SDC4P31431 MIR378A-201ENST00000362177 66 ntBASIC1.33□□□□□ -2.2
SDC4P31431 SNORA51.6-201ENST00000384151 125 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms