Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMNB1P20700 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMNB1P20700 MTND5P30-201ENST00000452896 1731 ntBASIC5□□□□□ -1.61
LMNB1P20700 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMNB1P20700 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.99□□□□□ -1.61
LMNB1P20700 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-1303P-201ENST00000364841 107 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-1040P-201ENST00000383974 107 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 Y_RNA.404-201ENST00000383978 102 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-890P-201ENST00000384121 107 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-434P-201ENST00000384376 107 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-882P-201ENST00000391025 103 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RPS12P24-201ENST00000412619 387 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.99□□□□□ -1.61
LMNB1P20700 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.99□□□□□ -1.61
LMNB1P20700 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.99□□□□□ -1.61
LMNB1P20700 SNAP23P1-201ENST00000433229 246 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.99□□□□□ -1.61
LMNB1P20700 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.99□□□□□ -1.61
LMNB1P20700 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
LMNB1P20700 RPL7P42-201ENST00000481005 679 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RN7SL293P-201ENST00000481765 281 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AC108022.1-201ENST00000493466 478 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AC021146.3-201ENST00000511911 260 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNA5SP446-201ENST00000515955 82 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 SNORA31.3-201ENST00000516029 96 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RNU6-352P-201ENST00000516908 107 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 RANP9-201ENST00000519957 271 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.99□□□□□ -1.61
LMNB1P20700 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.99□□□□□ -1.61
LMNB1P20700 RPL23AP97-201ENST00000568955 471 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AL359547.2-201ENST00000615810 418 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 AC010378.1-201ENST00000619270 362 ntBASIC4.99□□□□□ -1.61
LMNB1P20700 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.99□□□□□ -1.61
LMNB1P20700 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMNB1P20700 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.98□□□□□ -1.61
LMNB1P20700 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.98□□□□□ -1.61
LMNB1P20700 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.98□□□□□ -1.61
LMNB1P20700 RNVU1-14-201ENST00000384770 164 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 MIR568-201ENST00000385036 95 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 RPL7AP73-201ENST00000413490 353 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 RPL7P10-201ENST00000417407 739 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.98□□□□□ -1.61
LMNB1P20700 AL160275.3-201ENST00000423876 471 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.98□□□□□ -1.61
LMNB1P20700 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.98□□□□□ -1.61
LMNB1P20700 TXNP1-201ENST00000441872 371 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.98□□□□□ -1.61
LMNB1P20700 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.98□□□□□ -1.61
LMNB1P20700 AL135752.1-201ENST00000479477 471 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 DEFB109F-201ENST00000491870 277 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.98□□□□□ -1.61
LMNB1P20700 AC097473.1-201ENST00000508142 408 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AC116337.1-201ENST00000509680 687 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AC026782.1-201ENST00000512952 449 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 Y_RNA.670-201ENST00000516255 105 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 RN7SKP258-201ENST00000517151 304 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.98□□□□□ -1.61
LMNB1P20700 RNU6-323P-201ENST00000521915 107 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.98□□□□□ -1.61
LMNB1P20700 AC087499.8-201ENST00000578406 226 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 MIR4680-201ENST00000580906 66 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 SDR42E1P2-201ENST00000614861 481 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AC092608.2-201ENST00000624427 218 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 AL732372.2-225ENST00000642124 456 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
LMNB1P20700 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LMNB1P20700 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMNB1P20700 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMNB1P20700 AC027290.2-201ENST00000623210 18662 ntBASIC4.98□□□□□ -1.61
LMNB1P20700 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMNB1P20700 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMNB1P20700 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LMNB1P20700 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.97□□□□□ -1.61
LMNB1P20700 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
LMNB1P20700 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMNB1P20700 RNU6-95P-201ENST00000384697 107 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 AL391417.1-201ENST00000404100 426 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 MIR1179-201ENST00000408703 91 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.97□□□□□ -1.61
LMNB1P20700 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.97□□□□□ -1.61
LMNB1P20700 AC018865.2-201ENST00000423631 129 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 AL035666.1-201ENST00000446195 348 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 NDUFS5P3-201ENST00000450668 321 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.97□□□□□ -1.61
LMNB1P20700 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.97□□□□□ -1.61
LMNB1P20700 RNU6-976P-201ENST00000516086 111 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 RNU6-677P-201ENST00000516914 101 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.97□□□□□ -1.61
LMNB1P20700 AC012119.1-201ENST00000603184 222 ntBASIC4.97□□□□□ -1.61
LMNB1P20700 AC174048.1-201ENST00000603389 144 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms