Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFRAP16234 RNU2-10P-201ENST00000516375 211 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 RNA5SP471-201ENST00000516971 106 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AC011979.2-201ENST00000527568 352 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AP003181.2-201ENST00000528941 181 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFRAP16234 AC109446.2-201ENST00000567872 497 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFRAP16234 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFRAP16234 AC004805.2-201ENST00000605382 482 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFRAP16234 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFRAP16234 UBE2L2-201ENST00000254302 429 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RNU6-7-201ENST00000364784 107 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RNU6-8-201ENST00000365467 107 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RNU5E-6P-201ENST00000365574 115 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 SNORA18.3-201ENST00000384122 132 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFRAP16234 RNU2-36P-201ENST00000410361 191 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 Y_RNA.598-201ENST00000410480 95 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFRAP16234 SEPT2P1-201ENST00000419651 180 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 ISCA1P1-201ENST00000426679 387 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AC104651.1-201ENST00000427559 735 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 CETN4P-201ENST00000432407 469 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFRAP16234 HMGB3P12-201ENST00000438745 556 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RPS24P13-201ENST00000442520 397 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 NEFMP1-201ENST00000443423 1006 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFRAP16234 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFRAP16234 RPL23AP20-201ENST00000447965 421 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 CECR9-201ENST00000453421 199 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 SNRPFP4-201ENST00000456366 242 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RPL37P6-201ENST00000460682 294 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 MRPS17P3-201ENST00000465453 385 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 RPS27P26-201ENST00000494583 239 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFRAP16234 RNU1-103P-201ENST00000516502 125 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
PDGFRAP16234 AP003467.2-201ENST00000520175 319 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AP003122.4-201ENST00000530980 758 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.96□□□□□ -1.94
PDGFRAP16234 AC024153.1-201ENST00000603103 365 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AC007619.2-201ENST00000605743 379 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFRAP16234 AC107294.1-201ENST00000609524 467 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 MIR7106-201ENST00000612419 65 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 AC025594.3-201ENST00000613068 790 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFRAP16234 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFRAP16234 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFRAP16234 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFRAP16234 ZNF519P1-201ENST00000449011 1626 ntBASIC2.96□□□□□ -1.94
PDGFRAP16234 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFRAP16234 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFRAP16234 RNU4-21P-201ENST00000362802 126 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 RNU6-884P-201ENST00000363889 107 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 RNU4-1-201ENST00000363925 141 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 MT-TH-201ENST00000387441 69 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 MRPL42P2-201ENST00000403169 426 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 RPS15AP12-201ENST00000419498 388 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFRAP16234 AL139281.1-201ENST00000422120 335 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 CYCSP46-201ENST00000423569 204 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFRAP16234 COX6CP2-201ENST00000444980 225 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 TAF9P1-201ENST00000445421 515 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 WASF1P1-201ENST00000447560 1131 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 FABP5P15-201ENST00000453566 214 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 TAF9P2-201ENST00000454958 515 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 MTCO2P29-201ENST00000465212 189 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFRAP16234 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PDGFRAP16234 AL359212.1-201ENST00000556608 614 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 MTND3P12-201ENST00000559068 328 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 CYCSP39-201ENST00000565821 309 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 HMGN2P15-201ENST00000585707 270 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFRAP16234 AL358072.1-201ENST00000604156 575 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 AC091931.1-201ENST00000623488 728 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFRAP16234 AC099654.13-201ENST00000639774 207 ntBASIC2.95□□□□□ -1.94
PDGFRAP16234 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PDGFRAP16234 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFRAP16234 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFRAP16234 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 RNU6-817P-201ENST00000391083 104 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 AL021407.1-201ENST00000404531 386 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 RNU2-25P-201ENST00000411041 191 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFRAP16234 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFRAP16234 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.94□□□□□ -1.94
PDGFRAP16234 AC137499.1-201ENST00000427602 88 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 GPM6BP2-201ENST00000432046 144 ntBASIC2.94□□□□□ -1.94
PDGFRAP16234 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFRAP16234 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFRAP16234 GPM6BP1-201ENST00000446387 144 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms