Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC025588.2-201ENST00000604851 466 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AC026790.2-201ENST00000606282 430 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AC107214.2-201ENST00000608204 634 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AC108747.1-201ENST00000609508 535 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AC021755.4-201ENST00000616620 456 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AL031667.3-201ENST00000620124 655 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 AP003399.1-201ENST00000637534 361 ntBASIC2.08□□□□□ -2.08
HLA-DPB1P04440 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DPB1P04440 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DPB1P04440 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DPB1P04440 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 Y_RNA.97-201ENST00000363094 102 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 RNU1-105P-201ENST00000363470 161 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 RNU6-1214P-201ENST00000363650 109 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 U3.12-201ENST00000364498 214 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AL356057.2-201ENST00000403318 432 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AL513477.1-202ENST00000417061 214 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC009963.1-201ENST00000417265 157 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 RPS15AP7-201ENST00000439294 405 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 LINC00888-204ENST00000487386 421 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AL160314.1-201ENST00000490836 438 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 GLYCAM1-201ENST00000546596 285 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC009097.3-201ENST00000563557 1018 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 MIR6852-201ENST00000621699 66 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC091965.5-201ENST00000624785 342 ntBASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPB1P04440 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 Y_RNA.46-201ENST00000362695 102 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 RNU5A-8P-201ENST00000364102 114 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 ANAPC10P1-201ENST00000395991 556 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL359511.1-201ENST00000402970 211 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 RNU2-49P-201ENST00000410666 184 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 RNU6-193P-201ENST00000410977 107 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 SKA2P1-201ENST00000425592 390 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 WARS2P1-201ENST00000429678 537 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 MTND1P28-201ENST00000435623 950 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL354941.1-201ENST00000438600 464 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 GDI2P2-201ENST00000445131 608 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 DPPA3P1-201ENST00000448050 469 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 CECR9-201ENST00000453421 199 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 MTCO1P42-201ENST00000457379 726 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC092798.1-201ENST00000458542 409 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 RPL23AP70-201ENST00000483361 460 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 RNA5SP290-201ENST00000517133 127 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 MTATP6P15-201ENST00000527233 835 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 DEFB108A-201ENST00000530110 222 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC093012.1-202ENST00000549403 582 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL359212.1-201ENST00000556608 614 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC090888.2-201ENST00000559765 1144 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 OR1M4P-201ENST00000589199 287 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms