Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC021851.1-201ENST00000608537 1082 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA1O95477 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA1O95477 RNU6-152P-201ENST00000384037 107 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 RPS3AP44-201ENST00000425466 790 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AL035410.1-201ENST00000427409 427 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 MTND2P29-201ENST00000438595 412 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 RFC5P1-201ENST00000454419 874 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA1O95477 AC022493.1-201ENST00000492984 337 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC008837.2-201ENST00000513076 418 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC008676.3-201ENST00000521237 435 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA1O95477 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.04□□□□□ -2.24
ABCA1O95477 SETP7-201ENST00000552169 453 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 MTCO1P40-201ENST00000574371 625 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 MIR98-201ENST00000606724 119 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC007038.2-201ENST00000608095 740 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA1O95477 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ABCA1O95477 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ABCA1O95477 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ABCA1O95477 HMGB1P5-201ENST00000255320 642 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 MT-TC-201ENST00000387405 66 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 RNU6-220P-201ENST00000390919 107 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 EDDM3CP-201ENST00000415977 425 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.03□□□□□ -2.24
ABCA1O95477 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.03□□□□□ -2.24
ABCA1O95477 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.03□□□□□ -2.24
ABCA1O95477 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.03□□□□□ -2.24
ABCA1O95477 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
ABCA1O95477 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.03□□□□□ -2.24
ABCA1O95477 SNORA31.25-201ENST00000517242 134 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.03□□□□□ -2.24
ABCA1O95477 AC022616.2-201ENST00000523185 300 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.03□□□□□ -2.24
ABCA1O95477 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.03□□□□□ -2.24
ABCA1O95477 MIR3122-201ENST00000577243 73 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 AC135507.1-201ENST00000607214 561 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 AC011330.2-201ENST00000621680 635 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
ABCA1O95477 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.24
ABCA1O95477 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.03□□□□□ -2.25
ABCA1O95477 ENSAP3-201ENST00000312710 333 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 DEFB108F-201ENST00000344638 222 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 MIR421-201ENST00000365696 85 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 SNORA51.12-201ENST00000384448 134 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AL512604.1-201ENST00000404812 257 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.03□□□□□ -2.25
ABCA1O95477 AC005297.2-201ENST00000450430 606 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 SNRPFP3-201ENST00000457792 225 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 RN7SKP49-201ENST00000516675 260 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AP005597.4-201ENST00000526762 229 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 DEFB108D-201ENST00000527787 222 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AC025165.5-201ENST00000602802 578 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.03□□□□□ -2.25
ABCA1O95477 AP003400.5-201ENST00000624827 617 ntBASIC1.03□□□□□ -2.25
ABCA1O95477 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.02□□□□□ -2.25
ABCA1O95477 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.02□□□□□ -2.25
ABCA1O95477 RNU4-23P-201ENST00000362839 140 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 SNORA3A-201ENST00000364113 130 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 RNU6-374P-201ENST00000364146 108 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA1O95477 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
ABCA1O95477 snoU109.4-201ENST00000458953 143 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 CBX3P3-201ENST00000508108 532 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA1O95477 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA1O95477 AL121821.2-201ENST00000556081 394 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.02□□□□□ -2.25
ABCA1O95477 SULT1C2P1-202ENST00000562418 459 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 AC005498.1-201ENST00000592125 465 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 AC018618.2-201ENST00000604770 446 ntBASIC1.02□□□□□ -2.25
ABCA1O95477 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ABCA1O95477 MIR147B-201ENST00000390185 80 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AL033519.2-201ENST00000403958 392 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AC010385.1-201ENST00000412374 256 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AP000949.1-201ENST00000438328 629 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AL714022.1-201ENST00000439897 151 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 SDCBPP1-201ENST00000440192 890 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AL049714.1-201ENST00000466686 347 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AC116337.2-201ENST00000477662 156 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 RPS27P23-201ENST00000487608 251 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA1O95477 AP003400.6-201ENST00000624698 740 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
ABCA1O95477 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ABCA1O95477 RN7SKP158-201ENST00000410453 326 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 RNU6-516P-201ENST00000411381 104 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AL356379.1-201ENST00000414105 126 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA1O95477 Z82210.1-201ENST00000440037 231 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 KLF3P2-201ENST00000465138 268 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AC022447.1-201ENST00000515358 464 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms