Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL714022.1-201ENST00000439897 151 ntBASIC2.05□□□□□ -2.08
PCF11O94913 AC116337.2-201ENST00000477662 156 ntBASIC2.05□□□□□ -2.08
PCF11O94913 KLRA1P-201ENST00000503499 986 ntBASIC2.05□□□□□ -2.08
PCF11O94913 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.05□□□□□ -2.08
PCF11O94913 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.05□□□□□ -2.08
PCF11O94913 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.05□□□□□ -2.08
PCF11O94913 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
PCF11O94913 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.05□□□□□ -2.08
PCF11O94913 VN1R88P-201ENST00000596787 292 ntBASIC2.05□□□□□ -2.08
PCF11O94913 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.05□□□□□ -2.08
PCF11O94913 AC245884.12-201ENST00000615364 59 ntBASIC2.05□□□□□ -2.08
PCF11O94913 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCF11O94913 AP003399.1-201ENST00000637534 361 ntBASIC2.05□□□□□ -2.08
PCF11O94913 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCF11O94913 TAF9BP2-201ENST00000400856 499 ntBASIC2.04□□□□□ -2.08
PCF11O94913 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.04□□□□□ -2.08
PCF11O94913 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.04□□□□□ -2.08
PCF11O94913 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.04□□□□□ -2.08
PCF11O94913 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.04□□□□□ -2.08
PCF11O94913 RNU6-760P-201ENST00000516078 97 ntBASIC2.04□□□□□ -2.08
PCF11O94913 RNU6-405P-201ENST00000516637 110 ntBASIC2.04□□□□□ -2.08
PCF11O94913 RNU6-467P-201ENST00000517027 110 ntBASIC2.04□□□□□ -2.08
PCF11O94913 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.04□□□□□ -2.08
PCF11O94913 HSPE1P3-201ENST00000559254 309 ntBASIC2.04□□□□□ -2.08
PCF11O94913 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.04□□□□□ -2.08
PCF11O94913 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.04□□□□□ -2.08
PCF11O94913 AC005332.10-201ENST00000612725 619 ntBASIC2.04□□□□□ -2.08
PCF11O94913 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCF11O94913 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCF11O94913 RNA5SP257-201ENST00000363023 116 ntBASIC2.03□□□□□ -2.08
PCF11O94913 U3.20-201ENST00000390909 217 ntBASIC2.03□□□□□ -2.08
PCF11O94913 AC074117.2-201ENST00000417130 397 ntBASIC2.03□□□□□ -2.08
PCF11O94913 RPP40P1-201ENST00000426762 456 ntBASIC2.03□□□□□ -2.08
PCF11O94913 AC012497.1-201ENST00000429392 575 ntBASIC2.03□□□□□ -2.08
PCF11O94913 MTND5P25-201ENST00000430499 799 ntBASIC2.03□□□□□ -2.08
PCF11O94913 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
PCF11O94913 TRGVB-201ENST00000453257 471 ntBASIC2.03□□□□□ -2.08
PCF11O94913 AC021382.1-201ENST00000483523 359 ntBASIC2.03□□□□□ -2.08
PCF11O94913 RPL30P5-201ENST00000494923 336 ntBASIC2.03□□□□□ -2.08
PCF11O94913 MTCO3P42-201ENST00000509488 518 ntBASIC2.03□□□□□ -2.08
PCF11O94913 MTCO3P39-201ENST00000514812 518 ntBASIC2.03□□□□□ -2.08
PCF11O94913 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
PCF11O94913 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.03□□□□□ -2.08
PCF11O94913 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.03□□□□□ -2.08
PCF11O94913 AC009902.3-201ENST00000606235 2172 ntBASIC2.03□□□□□ -2.09
PCF11O94913 RNU4-72P-201ENST00000410754 173 ntBASIC2.02□□□□□ -2.09
PCF11O94913 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.02□□□□□ -2.09
PCF11O94913 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.02□□□□□ -2.09
PCF11O94913 THAP5P1-201ENST00000439089 262 ntBASIC2.02□□□□□ -2.09
PCF11O94913 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PCF11O94913 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCF11O94913 AC079776.3-201ENST00000450665 370 ntBASIC2.02□□□□□ -2.09
PCF11O94913 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.02□□□□□ -2.09
PCF11O94913 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 AC008127.2-201ENST00000549925 1075 ntBASIC2.02□□□□□ -2.09
PCF11O94913 MIR4658-201ENST00000584344 65 ntBASIC2.02□□□□□ -2.09
PCF11O94913 AL138955.1-201ENST00000622881 1040 ntBASIC2.02□□□□□ -2.09
PCF11O94913 HMGB1P5-201ENST00000255320 642 ntBASIC2.02□□□□□ -2.09
PCF11O94913 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCF11O94913 SEPT2P1-201ENST00000419651 180 ntBASIC2.02□□□□□ -2.09
PCF11O94913 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.02□□□□□ -2.09
PCF11O94913 RPS3AP44-201ENST00000425466 790 ntBASIC2.02□□□□□ -2.09
PCF11O94913 IFNA20P-201ENST00000436840 528 ntBASIC2.02□□□□□ -2.09
PCF11O94913 RNU7-26P-201ENST00000458980 63 ntBASIC2.02□□□□□ -2.09
PCF11O94913 NDUFB4P2-201ENST00000509515 391 ntBASIC2.02□□□□□ -2.09
PCF11O94913 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.02□□□□□ -2.09
PCF11O94913 OR5AQ1P-201ENST00000527596 927 ntBASIC2.02□□□□□ -2.09
PCF11O94913 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PCF11O94913 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.02□□□□□ -2.09
PCF11O94913 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.02□□□□□ -2.09
PCF11O94913 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PCF11O94913 SNORA27.3-201ENST00000364937 134 ntBASIC2.01□□□□□ -2.09
PCF11O94913 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.01□□□□□ -2.09
PCF11O94913 AC098614.2-201ENST00000426040 255 ntBASIC2.01□□□□□ -2.09
PCF11O94913 PABPC1P3-201ENST00000469174 459 ntBASIC2.01□□□□□ -2.09
PCF11O94913 EIF4EP3-201ENST00000498782 656 ntBASIC2.01□□□□□ -2.09
PCF11O94913 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.01□□□□□ -2.09
PCF11O94913 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.01□□□□□ -2.09
PCF11O94913 AC090821.2-201ENST00000523552 176 ntBASIC2.01□□□□□ -2.09
PCF11O94913 ZNF705CP-201ENST00000530515 889 ntBASIC2.01□□□□□ -2.09
PCF11O94913 CYCSP26-201ENST00000534107 320 ntBASIC2.01□□□□□ -2.09
PCF11O94913 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.01□□□□□ -2.09
PCF11O94913 AC025594.3-201ENST00000613068 790 ntBASIC2.01□□□□□ -2.09
PCF11O94913 MIR7515-201ENST00000637837 67 ntBASIC2.01□□□□□ -2.09
PCF11O94913 MTCO1P18-201ENST00000455518 1419 ntBASIC2.01□□□□□ -2.09
PCF11O94913 AP000648.3-201ENST00000623539 4507 ntBASIC2□□□□□ -2.09
PCF11O94913 Y_RNA.115-201ENST00000363272 98 ntBASIC2□□□□□ -2.09
PCF11O94913 SNORD82-201ENST00000365530 70 ntBASIC2□□□□□ -2.09
PCF11O94913 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
PCF11O94913 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2□□□□□ -2.09
PCF11O94913 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2□□□□□ -2.09
PCF11O94913 AL356867.1-201ENST00000429623 299 ntBASIC2□□□□□ -2.09
PCF11O94913 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2□□□□□ -2.09
PCF11O94913 AL592447.1-201ENST00000447592 540 ntBASIC2□□□□□ -2.09
PCF11O94913 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2□□□□□ -2.09
PCF11O94913 AC008837.2-201ENST00000513076 418 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms