Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 RNU6-1336P-201ENST00000383886 109 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 RNY3P5-201ENST00000384127 102 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 SNORD12C-201ENST00000386307 89 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 MIR670-201ENST00000390142 98 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 RNU6-1228P-201ENST00000391014 107 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 RNA5SP44-201ENST00000410446 133 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 NDUFS5P4-201ENST00000412983 318 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA3O60609 RPL39P39-201ENST00000455840 151 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 RN7SL165P-201ENST00000477476 291 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 RPS15AP34-201ENST00000487776 387 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 RPL23AP53-201ENST00000521854 457 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 AC006199.1-201ENST00000548728 219 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 MRPS21P9-201ENST00000571150 257 ntBASIC5.24□□□□□ -1.57
GFRA3O60609 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA3O60609 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GFRA3O60609 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA3O60609 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA3O60609 RNU6-1113P-201ENST00000384348 107 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 RNU6-159P-201ENST00000391080 106 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 RNA5SP113-201ENST00000410486 84 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 MTATP8P2-201ENST00000435212 202 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA3O60609 AC010618.1-201ENST00000469924 477 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA3O60609 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA3O60609 RNA5SP373-201ENST00000517271 95 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 AC136628.3-201ENST00000521868 290 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 MIR1273C-201ENST00000578669 77 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA3O60609 AL356218.2-201ENST00000605264 187 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 AC004467.1-201ENST00000615678 330 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 AL591926.8-201ENST00000616876 211 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA3O60609 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA3O60609 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 DNM1P47-203ENST00000571780 12667 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA3O60609 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA3O60609 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA3O60609 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA3O60609 AC068769.1-201ENST00000474767 2426 ntBASIC5.23□□□□□ -1.57
GFRA3O60609 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.23□□□□□ -1.57
GFRA3O60609 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA3O60609 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA3O60609 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
GFRA3O60609 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA3O60609 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA3O60609 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA3O60609 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA3O60609 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
GFRA3O60609 RNA5SP387-201ENST00000364226 106 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 Y_RNA.329-201ENST00000365209 107 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 RNU6-1014P-201ENST00000383940 103 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 Y_RNA.549-201ENST00000384657 102 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GFRA3O60609 BTF3L4P2-201ENST00000392798 346 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 GPS2P1-201ENST00000411761 986 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA3O60609 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.22□□□□□ -1.57
GFRA3O60609 AL162739.1-201ENST00000450606 307 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 AC021205.2-201ENST00000480069 347 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 AC022137.1-201ENST00000483735 151 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 RNU6-857P-201ENST00000515893 110 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 RNA5SP367-201ENST00000516557 118 ntBASIC5.22□□□□□ -1.57
GFRA3O60609 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.22□□□□□ -1.57
GFRA3O60609 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.22□□□□□ -1.57
GFRA3O60609 AC007012.1-201ENST00000567192 175 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms