Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC068880.5-201ENST00000624331 290 ntBASIC2.84□□□□□ -1.95
SNX3O60493 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX3O60493 MTND5P42-201ENST00000637720 498 ntBASIC2.84□□□□□ -1.95
SNX3O60493 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNX3O60493 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
SNX3O60493 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SNX3O60493 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.84□□□□□ -1.96
SNX3O60493 AC233263.6-201ENST00000631132 1963 ntBASIC2.83□□□□□ -1.96
SNX3O60493 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 RNU4-24P-201ENST00000364565 139 ntBASIC2.83□□□□□ -1.96
SNX3O60493 SNORD21-201ENST00000383953 95 ntBASIC2.83□□□□□ -1.96
SNX3O60493 RNU6-641P-201ENST00000384006 107 ntBASIC2.83□□□□□ -1.96
SNX3O60493 Y_RNA.436-201ENST00000384097 102 ntBASIC2.83□□□□□ -1.96
SNX3O60493 RNU2-39P-201ENST00000410604 198 ntBASIC2.83□□□□□ -1.96
SNX3O60493 RPS12P24-201ENST00000412619 387 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX3O60493 RPL21P40-201ENST00000428586 483 ntBASIC2.83□□□□□ -1.96
SNX3O60493 GPM6BP2-201ENST00000432046 144 ntBASIC2.83□□□□□ -1.96
SNX3O60493 RPL23AP30-201ENST00000432419 501 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX3O60493 HSPD1P21-201ENST00000436541 245 ntBASIC2.83□□□□□ -1.96
SNX3O60493 SNRPEP9-201ENST00000436794 238 ntBASIC2.83□□□□□ -1.96
SNX3O60493 GPM6BP1-201ENST00000446387 144 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX3O60493 RNU6-953P-201ENST00000459154 107 ntBASIC2.83□□□□□ -1.96
SNX3O60493 RPL37P6-201ENST00000460682 294 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC117440.1-201ENST00000474107 571 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 RPL39P36-201ENST00000490784 156 ntBASIC2.83□□□□□ -1.96
SNX3O60493 MTND4LP22-201ENST00000508209 276 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC098799.2-201ENST00000509466 868 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 RN7SKP298-201ENST00000515950 94 ntBASIC2.83□□□□□ -1.96
SNX3O60493 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SNX3O60493 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX3O60493 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.83□□□□□ -1.96
SNX3O60493 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 AL356575.1-201ENST00000603008 283 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC119501.1-201ENST00000603646 475 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AL121992.2-201ENST00000606262 256 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC103591.3-201ENST00000608684 209 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC107294.1-201ENST00000609524 467 ntBASIC2.83□□□□□ -1.96
SNX3O60493 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 AC005332.10-201ENST00000612725 619 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AL121772.2-201ENST00000614331 297 ntBASIC2.83□□□□□ -1.96
SNX3O60493 AC018692.3-201ENST00000623929 123 ntBASIC2.83□□□□□ -1.96
SNX3O60493 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 MTND5P29-201ENST00000458676 1807 ntBASIC2.83□□□□□ -1.96
SNX3O60493 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNX3O60493 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX3O60493 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX3O60493 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SNX3O60493 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
SNX3O60493 Y_RNA.194-201ENST00000363985 102 ntBASIC2.82□□□□□ -1.96
SNX3O60493 Y_RNA.318-201ENST00000365131 97 ntBASIC2.82□□□□□ -1.96
SNX3O60493 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNX3O60493 MIR218-2-201ENST00000385006 110 ntBASIC2.82□□□□□ -1.96
SNX3O60493 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNX3O60493 MIR1193-201ENST00000408109 78 ntBASIC2.82□□□□□ -1.96
SNX3O60493 CYCSP19-201ENST00000411715 316 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX3O60493 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX3O60493 AC069157.1-201ENST00000421749 137 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX3O60493 RPL7P46-201ENST00000425129 740 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC133104.1-201ENST00000429100 218 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AL592045.1-201ENST00000429867 352 ntBASIC2.82□□□□□ -1.96
SNX3O60493 USP9YP14-201ENST00000430663 563 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AL445584.1-201ENST00000431451 330 ntBASIC2.82□□□□□ -1.96
SNX3O60493 VN1R108P-201ENST00000431580 830 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX3O60493 AL714022.1-201ENST00000439897 151 ntBASIC2.82□□□□□ -1.96
SNX3O60493 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNX3O60493 AC093899.1-201ENST00000457984 376 ntBASIC2.82□□□□□ -1.96
SNX3O60493 RN7SL863P-201ENST00000462370 296 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC104472.2-201ENST00000469035 601 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC110794.1-201ENST00000505816 425 ntBASIC2.82□□□□□ -1.96
SNX3O60493 MTCO3P7-201ENST00000510008 774 ntBASIC2.82□□□□□ -1.96
SNX3O60493 MTND3P5-201ENST00000512798 333 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX3O60493 RNU6-677P-201ENST00000516914 101 ntBASIC2.82□□□□□ -1.96
SNX3O60493 RNA5SP165-201ENST00000517142 115 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC090136.1-201ENST00000520009 240 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX3O60493 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms