Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
AP3B1O00203 AL138955.1-201ENST00000622881 1040 ntBASIC2.34□□□□□ -2.03
AP3B1O00203 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.34□□□□□ -2.03
AP3B1O00203 AL109809.4-201ENST00000603520 2185 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
AP3B1O00203 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
AP3B1O00203 RNU6-853P-201ENST00000364306 107 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 RPS4XP8-201ENST00000402039 771 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AL449283.1-202ENST00000418249 604 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.33□□□□□ -2.04
AP3B1O00203 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
AP3B1O00203 RPL36AP53-201ENST00000432891 316 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AL031659.1-201ENST00000447075 539 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3B1O00203 USP9YP10-201ENST00000454868 628 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC010631.1-201ENST00000474150 156 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC068781.1-201ENST00000488231 618 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3B1O00203 AC008526.1-201ENST00000509149 338 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.33□□□□□ -2.04
AP3B1O00203 SNORA19.3-201ENST00000516165 130 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 RN7SKP258-201ENST00000517151 304 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3B1O00203 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3B1O00203 AL121821.2-201ENST00000556081 394 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC098826.3-201ENST00000603823 466 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AL161798.1-201ENST00000604630 131 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC107294.1-201ENST00000609524 467 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 AC092574.1-201ENST00000609771 420 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
AP3B1O00203 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
AP3B1O00203 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP3B1O00203 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
AP3B1O00203 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3B1O00203 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 RNU6-621P-201ENST00000364752 109 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3B1O00203 RNU6-658P-201ENST00000384606 106 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.32□□□□□ -2.04
AP3B1O00203 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3B1O00203 AC004383.1-201ENST00000438135 289 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC007327.1-201ENST00000447461 264 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
AP3B1O00203 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC109445.1-201ENST00000512356 383 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP3B1O00203 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 AL133153.1-201ENST00000557756 303 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3B1O00203 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3B1O00203 AC025034.2-201ENST00000623264 286 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC007490.1-201ENST00000624321 703 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 AC097655.1-201ENST00000635075 318 ntBASIC2.32□□□□□ -2.04
AP3B1O00203 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3B1O00203 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP3B1O00203 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
AP3B1O00203 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP3B1O00203 RPL21P132-201ENST00000331267 462 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP3B1O00203 Y_RNA.472-201ENST00000384322 102 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 U3.37-201ENST00000408528 213 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 USP9YP6-201ENST00000413550 854 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3B1O00203 NANOGP5-201ENST00000424456 877 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 HMGB1P27-201ENST00000431429 603 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3B1O00203 AC005410.1-202ENST00000460347 485 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3B1O00203 AC004263.1-201ENST00000479327 332 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 RNU6-276P-201ENST00000516114 96 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
AP3B1O00203 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3B1O00203 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3B1O00203 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP3B1O00203 MIR3162-201ENST00000581818 82 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC007229.1-201ENST00000590455 412 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC006270.3-201ENST00000605967 1036 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC026790.2-201ENST00000606282 430 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3B1O00203 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3B1O00203 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC245297.2-201ENST00000610119 565 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AL121895.2-201ENST00000619558 447 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC109809.1-201ENST00000619665 545 ntBASIC2.31□□□□□ -2.04
AP3B1O00203 AC024581.2-201ENST00000619986 252 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms