Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR5195-201ENST00000583555 115 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR3158-1-201ENST00000583596 81 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 MIMT1-201ENST00000597105 1050 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AL671309.1-201ENST00000603750 544 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 SNRPGP17-201ENST00000603780 214 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.15-201ENST00000611544 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.16-201ENST00000613119 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.12-201ENST00000613778 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.20-201ENST00000613956 192 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.9-201ENST00000615427 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.11-201ENST00000616345 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.2-201ENST00000616535 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.3-201ENST00000617785 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.19-201ENST00000618602 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU2-1-201ENST00000618664 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.6-201ENST00000619225 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.5-201ENST00000619465 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 U2.10-201ENST00000620268 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AP003400.6-201ENST00000624698 740 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC243829.7-201ENST00000633081 225 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 TEX21P-201ENST00000447107 1476 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-253P-201ENST00000384730 105 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL23AP29-201ENST00000397284 453 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AL109755.1-201ENST00000401791 649 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU6-1140P-201ENST00000410517 106 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU2-47P-201ENST00000410649 186 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006946.1-201ENST00000429106 328 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 CR769776.1-201ENST00000441254 787 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 FTH1P2-201ENST00000466086 412 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL30P7-201ENST00000479312 323 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AL133373.1-201ENST00000497098 94 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 SMURF2P1-201ENST00000514992 481 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORA25.15-201ENST00000516487 89 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORD19.2-201ENST00000516978 73 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AP003122.3-201ENST00000526316 255 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 CCNG2P1-201ENST00000549521 1000 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AL031176.1-201ENST00000604554 466 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AC079610.2-201ENST00000604818 690 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR8081-201ENST00000611533 95 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR8074-201ENST00000615081 81 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006386.2-201ENST00000624491 75 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AC012005.1-201ENST00000624575 75 ntBASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CHKB-CPT1BH3BT56 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORD14B-201ENST00000364533 90 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU6-439P-201ENST00000384188 106 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR29C-201ENST00000385231 88 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR323B-201ENST00000385269 82 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AL590084.1-201ENST00000407885 387 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR1323-201ENST00000408090 73 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU2-15P-201ENST00000410692 191 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP501-201ENST00000410990 112 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 OR51A3P-201ENST00000413596 924 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AL591704.2-201ENST00000421658 181 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 C1DP1-201ENST00000426049 402 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC092634.2-201ENST00000428146 1010 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 ZYG11AP1-201ENST00000430329 837 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 MTCO1P53-201ENST00000441633 699 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL23AP16-201ENST00000441715 421 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC244505.3-201ENST00000454598 187 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 CKS1BP2-201ENST00000497342 240 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU1-92P-201ENST00000517017 135 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AP003122.4-201ENST00000530980 758 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006199.1-201ENST00000548728 219 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC021739.1-201ENST00000559631 174 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC015720.1-201ENST00000565251 277 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORD39.3-201ENST00000584451 71 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 NIFKP6-201ENST00000598115 845 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC136601.2-201ENST00000604356 474 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC103810.9-201ENST00000606688 112 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AL391516.1-201ENST00000554380 2449 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 ZNF72P-201ENST00000425869 1908 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 AL136360.1-201ENST00000503377 1900 ntBASIC0.64□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU6-271P-201ENST00000363858 105 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms