Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC004223.2-201ENST00000590309 544 ntBASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC098826.3-201ENST00000603823 466 ntBASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC138649.3-201ENST00000622154 254 ntBASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC084035.1-201ENST00000634543 607 ntBASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
TRBV4-1A0A0J9YWV2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 UBE2L2-201ENST00000254302 429 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 Y_RNA.41-201ENST00000362646 102 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 Y_RNA.367-201ENST00000365544 101 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC114491.1-201ENST00000416095 246 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RPL7P46-201ENST00000425129 740 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC104651.1-201ENST00000427559 735 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ELOCP14-201ENST00000428070 331 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC005300.1-201ENST00000428401 373 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 HMGB1P27-201ENST00000431429 603 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RPS29P6-201ENST00000438196 145 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ELOCP7-201ENST00000439968 331 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 HSPD1P15-201ENST00000505573 1122 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC026427.2-201ENST00000506228 536 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC117522.1-201ENST00000509821 380 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RNU6-720P-201ENST00000516363 108 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC022880.1-201ENST00000534017 973 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC009161.2-201ENST00000624626 138 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC103988.1-201ENST00000566382 2177 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL359693.1-201ENST00000614959 2407 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC010680.1-201ENST00000590024 3590 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 Y_RNA.159-201ENST00000363674 87 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 Y_RNA.296-201ENST00000364930 108 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RNU6-1035P-201ENST00000384477 107 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 FABP5P15-201ENST00000453566 214 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RNU6-953P-201ENST00000459154 107 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC091153.1-201ENST00000466297 402 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RPL39P36-201ENST00000490784 156 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC023194.1-201ENST00000493084 308 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 RNA5SP290-201ENST00000517133 127 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AP001646.1-201ENST00000527936 915 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 EIF1P4-201ENST00000572664 335 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC004832.5-201ENST00000608677 401 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC107294.1-201ENST00000609524 467 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC006111.3-201ENST00000622137 383 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AC093648.1-201ENST00000623546 606 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL359740.1-201ENST00000624340 592 ntBASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
TRBV4-1A0A0J9YWV2 MTND5P29-201ENST00000458676 1807 ntBASIC2.72□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
TRBV4-1A0A0J9YWV2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
TRBV4-1A0A0J9YWV2 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms