Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 AC007151.1-201ENST00000572774 483 ntBASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 AL138963.2-201ENST00000605137 226 ntBASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 AC006026.1-201ENST00000444025 1803 ntBASIC1.19□□□□□ -2.22
HLA-DRB4X5D2U9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 RNU6-77P-201ENST00000410554 91 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC074117.2-201ENST00000417130 397 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 BX510359.4-201ENST00000423750 193 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 MTND2P24-201ENST00000453434 806 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 SNORD121B-201ENST00000458838 81 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 HMGB1P35-201ENST00000503360 598 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC021146.2-201ENST00000504736 556 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 BNIP3P25-201ENST00000596023 559 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AL031274.2-201ENST00000599419 203 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AL391813.1-201ENST00000603098 260 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC098826.3-201ENST00000603823 466 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 BX248123.2-201ENST00000606318 124 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AP000238.1-201ENST00000608759 426 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC068944.2-201ENST00000610373 403 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC022202.1-201ENST00000613515 211 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 AC005858.4-201ENST00000623191 700 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 LINC02211-204ENST00000642024 1070 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 MTCO1P23-201ENST00000415223 1526 ntBASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.18□□□□□ -2.22
HLA-DRB4X5D2U9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC005832.2-201ENST00000538921 1430 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AP005901.5-201ENST00000545779 1796 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 MIR888-201ENST00000401186 77 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 SNORA11.2-201ENST00000408318 127 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 RNU6-955P-201ENST00000410497 104 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 RNU2-63P-201ENST00000410792 194 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC007098.1-201ENST00000420122 367 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC009238.1-201ENST00000442165 424 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC009237.6-201ENST00000446969 424 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 SSXP1-201ENST00000453640 473 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 RNU6-548P-201ENST00000517083 115 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 SNORA31.22-201ENST00000517204 135 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 HSPA8P13-201ENST00000523715 472 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AP005597.4-201ENST00000526762 229 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 MIR4765-201ENST00000585007 77 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC136601.2-201ENST00000604356 474 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC116312.1-201ENST00000606841 314 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 FTX_3.1-201ENST00000610451 147 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC108479.2-201ENST00000617314 601 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AL445493.3-201ENST00000619568 477 ntBASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DRB4X5D2U9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 RNU6-884P-201ENST00000363889 107 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 RNA5SP190-201ENST00000365222 118 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 RNU6-140P-201ENST00000384566 108 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 MIR525-201ENST00000384978 85 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 NDUFS5P1-201ENST00000405668 289 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 RPS24P7-201ENST00000416921 246 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 CYCSP49-201ENST00000420810 319 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AL357134.1-201ENST00000445848 426 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 USP9YP10-201ENST00000454868 628 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 RPL12P25-201ENST00000455592 494 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 MRPS33P3-201ENST00000513456 322 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 IGJP1-201ENST00000522682 475 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 ARL2BPP5-201ENST00000523141 481 ntBASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DRB4X5D2U9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms