Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AP000907.1-201ENST00000428428 510 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RPL12P11-201ENST00000439970 501 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AC009296.1-201ENST00000443146 155 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AC016700.2-201ENST00000446011 156 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 Y_RNA.703-201ENST00000516846 111 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 CBX3P4-201ENST00000538909 354 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 TRAV28-201ENST00000557548 323 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR4782-201ENST00000577987 79 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AC037487.3-201ENST00000606668 112 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RMST_6.1-201ENST00000611980 203 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 SCARNA4-201ENST00000629045 128 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 U3.3-201ENST00000362986 216 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-843P-201ENST00000384454 104 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 PCNPP3-201ENST00000393579 471 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 RAB9AP3-201ENST00000412737 573 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 TMSB10P2-201ENST00000416049 131 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 EIF1AXP1-201ENST00000419267 435 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 RAB9AP1-201ENST00000449393 573 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AL353705.4-201ENST00000449661 238 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AL132838.2-201ENST00000492041 314 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 RPL23AP49-201ENST00000492925 468 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 SNORA31.8-201ENST00000516327 108 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AF186190.1-201ENST00000517470 480 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC069307.1-201ENST00000602820 447 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC011476.5-201ENST00000615594 130 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC008568.2-201ENST00000623862 2313 ntBASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA11Q9Y5H2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR411-201ENST00000362239 96 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNA5SP183-201ENST00000362452 119 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-105P-201ENST00000363909 104 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-17P-201ENST00000384245 107 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-18P-201ENST00000384527 107 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR1271-201ENST00000408537 86 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RPL17P36-201ENST00000420302 549 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RPL23AP75-201ENST00000491601 451 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 HMGB1P22-201ENST00000505315 124 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 OR7H2P-201ENST00000513483 306 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNA5SP362-201ENST00000516048 118 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-1212P-201ENST00000517023 104 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 AC107016.1-201ENST00000550463 337 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR4643-201ENST00000577473 78 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 MIR3133-201ENST00000583157 78 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 Z83818.1-201ENST00000603584 150 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 AL049767.1-202ENST00000637826 242 ntBASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA11Q9Y5H2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 Y_RNA.44-201ENST00000362676 108 ntBASIC4.99□□□□□ -1.61
PCDHGA11Q9Y5H2 SNORD115-32-201ENST00000364079 82 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms