Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AL590240.4-201ENST00000616908 390 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 U6.106-201ENST00000636360 105 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 OR9K1P-202ENST00000641111 3217 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 U3.2-201ENST00000362981 210 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RNA5SP235-201ENST00000365411 114 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-629P-201ENST00000384061 103 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-926P-201ENST00000384075 107 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RPL19P1-201ENST00000411635 428 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 CYP4F29P-201ENST00000420685 446 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RPL23AP65-201ENST00000475608 468 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC083982.1-201ENST00000485679 344 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RNU7-200P-201ENST00000516105 62 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SKP147-201ENST00000517154 244 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 MIR4480-201ENST00000582492 71 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC011921.3-201ENST00000605540 361 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 RMST_6.1-201ENST00000611980 203 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC027309.3-201ENST00000623419 351 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 SCARNA4-202ENST00000625402 129 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 AL359693.1-201ENST00000614959 2407 ntBASIC5.12□□□□□ -1.59
PCDHB11Q9Y5F2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.286-201ENST00000364813 102 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-1081P-201ENST00000384537 107 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPL17P36-201ENST00000420302 549 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 GNG5P5-201ENST00000420444 220 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC007919.1-201ENST00000429380 217 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AL356867.1-201ENST00000429623 299 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPS15AP7-201ENST00000439294 405 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPL23AP81-201ENST00000455252 467 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC091021.1-201ENST00000468051 388 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPS29P22-201ENST00000472363 168 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPL23AP75-201ENST00000491601 451 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 SNORA31.20-201ENST00000517111 133 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RNA5SP373-201ENST00000517271 95 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RPL23AP88-201ENST00000605759 454 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC009541.1-201ENST00000438279 2662 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 AC004925.1-201ENST00000624256 2706 ntBASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB11Q9Y5F2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms