Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 PRPF19P1-201ENST00000584766 898 ntBASIC5.29□□□□□ -1.56
NOD1Q9Y239 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 AL161629.2-201ENST00000615347 275 ntBASIC5.29□□□□□ -1.56
NOD1Q9Y239 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NOD1Q9Y239 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NOD1Q9Y239 AC022893.2-201ENST00000564832 3296 ntBASIC5.29□□□□□ -1.56
NOD1Q9Y239 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NOD1Q9Y239 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NOD1Q9Y239 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NOD1Q9Y239 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 RLIMP1-201ENST00000339626 1680 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 Y_RNA.27-201ENST00000362540 103 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 Y_RNA.84-201ENST00000363011 104 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 Y_RNA.245-201ENST00000364493 95 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 MIR10A-201ENST00000385043 110 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 ELOCP19-201ENST00000411919 318 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.28□□□□□ -1.56
NOD1Q9Y239 RPL23AP25-201ENST00000430973 463 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AL627311.1-201ENST00000431514 115 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC004383.1-201ENST00000438135 289 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 SCARNA15.2-201ENST00000516409 127 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 SNORA31.20-201ENST00000517111 133 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC091144.1-201ENST00000519573 138 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.28□□□□□ -1.56
NOD1Q9Y239 AP004371.1-201ENST00000525240 214 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AL590705.4-201ENST00000532209 134 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 MIR5699-201ENST00000578903 90 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC010201.1-201ENST00000605051 540 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AP001282.2-201ENST00000616149 309 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.28□□□□□ -1.56
NOD1Q9Y239 AC006971.1-201ENST00000407916 4486 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NOD1Q9Y239 TLK1P1-201ENST00000456760 2440 ntBASIC5.28□□□□□ -1.56
NOD1Q9Y239 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NOD1Q9Y239 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC004925.1-201ENST00000624256 2706 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NOD1Q9Y239 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NOD1Q9Y239 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NOD1Q9Y239 RNU6-338P-201ENST00000383888 105 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 Y_RNA.458-201ENST00000384240 102 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 RNU2-33P-201ENST00000410344 192 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 GNG5P5-201ENST00000420444 220 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC096920.1-201ENST00000423991 241 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 PIGPP3-201ENST00000425307 415 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 HIGD1AP2-201ENST00000446367 280 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 RPS17P2-201ENST00000461663 408 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 RPS20P22-201ENST00000473700 357 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AL160314.1-201ENST00000490836 438 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 RNU6-1256P-201ENST00000516539 103 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 RNU6-612P-201ENST00000516909 102 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC109479.2-201ENST00000517842 174 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC025755.1-201ENST00000521306 278 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC007458.1-201ENST00000542812 373 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC023575.1-201ENST00000580510 358 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 AC006077.1-201ENST00000604746 343 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 RNA5SP108-201ENST00000605921 117 ntBASIC5.27□□□□□ -1.57
NOD1Q9Y239 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NOD1Q9Y239 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AL136164.3-201ENST00000624429 3978 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 U3.6-201ENST00000363622 211 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 MIR548M-201ENST00000408260 86 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 GPS2P1-201ENST00000411761 986 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 Z85995.1-201ENST00000415547 335 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 RPS12P23-201ENST00000419579 400 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 RPEP3-201ENST00000425462 676 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 MTCO3P29-201ENST00000432119 779 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 RN7SL558P-201ENST00000497468 299 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 ENPP7P11-201ENST00000505915 627 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms