Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC01109-201ENST00000603837 3081 ntBASIC6.74□□□□□ -1.33
PHF8Q9UPP1 AP005432.1-201ENST00000580891 3485 ntBASIC6.74□□□□□ -1.33
PHF8Q9UPP1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHF8Q9UPP1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RNU4-56P-201ENST00000364700 142 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 MIR1193-201ENST00000408109 78 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RPL17P36-201ENST00000420302 549 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RPS27AP12-201ENST00000429552 465 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 CR769767.1-201ENST00000436337 346 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC009296.1-201ENST00000443146 155 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AL137159.1-201ENST00000452808 512 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC022795.1-201ENST00000473808 480 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RPS4XP22-201ENST00000480755 780 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 RPL21P13-201ENST00000488305 481 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC112693.2-201ENST00000556538 232 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC022726.1-201ENST00000587475 207 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 BPIFA4P-203ENST00000603168 689 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 MIR6133-201ENST00000617057 108 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC019206.1-201ENST00000621938 425 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 AL596275.2-206ENST00000641957 626 ntBASIC6.73□□□□□ -1.33
PHF8Q9UPP1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
PHF8Q9UPP1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 Y_RNA.7-201ENST00000362352 102 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RNU6-428P-201ENST00000362942 107 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 SNORD115-32-201ENST00000364079 82 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AL357515.1-201ENST00000402967 542 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC099336.2-201ENST00000422457 254 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 MRPS21P2-201ENST00000424704 264 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC008065.1-201ENST00000428525 348 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 COX6CP13-201ENST00000428703 226 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AL627311.1-201ENST00000431514 115 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC000111.2-201ENST00000448200 210 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC099560.2-201ENST00000457554 255 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RPS27AP9-201ENST00000477681 438 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RPL26P26-201ENST00000480251 434 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 SNORA40.9-201ENST00000515895 93 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RNU6-377P-201ENST00000515965 102 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RNU6-1114P-201ENST00000516022 107 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 RNA5SP471-201ENST00000516971 106 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC010928.2-201ENST00000588017 287 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AL008718.3-201ENST00000610217 321 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 AC006001.4-201ENST00000622243 395 ntBASIC6.72□□□□□ -1.33
PHF8Q9UPP1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHF8Q9UPP1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PHF8Q9UPP1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.71□□□□□ -1.33
PHF8Q9UPP1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 RNU6-1298P-201ENST00000362456 101 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 Y_RNA.71-201ENST00000362892 104 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 Y_RNA.75-201ENST00000362927 97 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 RNU6-626P-201ENST00000363354 107 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 Y_RNA.218-201ENST00000364218 104 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 MRPS10P1-201ENST00000448483 130 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 RN7SKP49-201ENST00000516675 260 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 BNIP3P5-201ENST00000562290 498 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 MIR1254-2-201ENST00000579553 63 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.71□□□□□ -1.34
PHF8Q9UPP1 AC023043.4-201ENST00000612081 449 ntBASIC6.71□□□□□ -1.34
PHF8Q9UPP1 AC135776.4-201ENST00000624300 1904 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms