Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC009878.1-201ENST00000621819 340 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 RNU5E-5P-201ENST00000365379 116 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 ELOCP17-201ENST00000414751 326 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 ARF4P2-201ENST00000430209 526 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 COX6CP12-201ENST00000446748 202 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC010468.1-201ENST00000461022 817 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 SETP11-201ENST00000473027 690 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC116337.2-201ENST00000477662 156 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC068657.1-201ENST00000520807 306 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC005951.2-201ENST00000576282 495 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC092354.1-201ENST00000606057 376 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AL049641.1-201ENST00000441055 1948 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 AC007785.2-201ENST00000598627 1916 ntBASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHROOM4Q9ULL8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RNU6-805P-201ENST00000365643 106 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AL354719.1-201ENST00000406535 843 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AL451054.2-201ENST00000420896 202 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC092047.1-201ENST00000424997 240 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 HMGN2P3-201ENST00000433603 273 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 HMGN2P5-201ENST00000436882 273 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RPS12P2-201ENST00000439728 269 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 MTND1P26-201ENST00000440488 538 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RNU6-64P-201ENST00000517119 105 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC123904.2-201ENST00000548059 300 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC008088.1-201ENST00000580993 280 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC025754.2-201ENST00000606491 432 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RNU6-87P-201ENST00000607561 108 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RNU6-1284P-201ENST00000363701 100 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 MIR325-201ENST00000385260 98 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 MRPL42P2-201ENST00000403169 426 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RPL7P12-201ENST00000446719 750 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC104472.2-201ENST00000469035 601 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 RNA5SP320-201ENST00000516263 124 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC022878.1-201ENST00000530684 149 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 MIR5697-201ENST00000578045 78 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 Z99497.2-201ENST00000603634 310 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AL022161.1-201ENST00000604390 213 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 OR5H6-203ENST00000642105 978 ntBASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM4Q9ULL8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 RNY3P13-201ENST00000365542 102 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 MIR1289-2-201ENST00000408360 111 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 EPS15P1-201ENST00000448836 336 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 RPS27AP9-201ENST00000477681 438 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 HPRT1P3-201ENST00000539521 576 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AC009063.1-201ENST00000563342 702 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AC007621.1-201ENST00000604544 437 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AL161729.4-201ENST00000604650 476 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 DLEU2_6.1-201ENST00000610536 112 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 FRG1KP-201ENST00000623592 341 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AP003122.6-201ENST00000623831 495 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AL136313.1-201ENST00000624804 202 ntBASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM4Q9ULL8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 SNORA14A-201ENST00000364773 135 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 RNU6-741P-201ENST00000383889 107 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 SNORD116-8-201ENST00000384365 95 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 Y_RNA.598-201ENST00000410480 95 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 Y_RNA.608-201ENST00000410647 95 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AL451074.5-201ENST00000415894 435 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms