Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC022080.3-201ENST00000544433 482 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 RRN3P3-201ENST00000549207 578 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC090617.3-201ENST00000573670 475 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 MIR4300-201ENST00000581016 96 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC007390.2-201ENST00000606229 3803 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC093799.2-201ENST00000610062 578 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 U6.99-201ENST00000637524 83 ntBASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXD3Q9UJU5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 SNORD27-201ENST00000363981 72 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 Y_RNA.237-201ENST00000364439 102 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 MIR1182-201ENST00000408363 97 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 U3.37-201ENST00000408528 213 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 RN7SKP216-201ENST00000411050 312 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 TMEM167AP1-201ENST00000423409 219 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 MTND5P15-201ENST00000434246 349 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 RPS29P10-201ENST00000439197 166 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 RPL31P13-201ENST00000484151 370 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AC083982.1-201ENST00000485679 344 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 GZMAP1-201ENST00000503054 631 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 ENPP7P11-201ENST00000505915 627 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 RNU6-703P-201ENST00000516946 107 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AP004607.1-201ENST00000524456 203 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 MIR4480-201ENST00000582492 71 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 MIR6748-201ENST00000610433 71 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AC112200.1-201ENST00000625015 234 ntBASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXD3Q9UJU5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 snoU2_19.2-201ENST00000363024 80 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 RNY1-201ENST00000364228 113 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 Y_RNA.539-201ENST00000384635 107 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 RNA5SP31-201ENST00000411144 127 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AP000907.1-201ENST00000428428 510 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 RPL21P40-201ENST00000428586 483 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC009238.2-201ENST00000431026 355 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 snoU13.30-201ENST00000458951 104 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 snoU109.2-201ENST00000459316 135 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 RNU4-71P-201ENST00000516258 113 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC022868.1-201ENST00000517767 391 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 MIR3936-201ENST00000584304 110 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC024153.1-201ENST00000603103 365 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 SCARNA4-201ENST00000629045 128 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 AC233981.2-201ENST00000611524 1614 ntBASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXD3Q9UJU5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms